RNA–Protein interactions for RNA: ENST00000536792.5

CDK8-205, Transcript of cyclin dependent kinase 8, humanhuman

TSL 1 (best)

Gene CDK8, Length 3,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8-205ENST00000536792 NISCHQ9Y2I1 1504 aa34.59■■■■□ 3.13
CDK8-205ENST00000536792 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
CDK8-205ENST00000536792 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
CDK8-205ENST00000536792 ABCC9O60706 1549 aa29.13■■■□□ 2.25
CDK8-205ENST00000536792 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
CDK8-205ENST00000536792 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
CDK8-205ENST00000536792 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
CDK8-205ENST00000536792 NACADO15069 1562 aa28.11■■■□□ 2.09
CDK8-205ENST00000536792 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
CDK8-205ENST00000536792 SCRIBQ14160 1630 aa28■■■□□ 2.07
CDK8-205ENST00000536792 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
CDK8-205ENST00000536792 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
CDK8-205ENST00000536792 UNC13AQ9UPW8 1703 aa27.52■■■□□ 2
CDK8-205ENST00000536792 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
CDK8-205ENST00000536792 HRCP23327 699 aa27.45■■□□□ 1.99
CDK8-205ENST00000536792 PPARGC1BQ86YN6 1023 aaKnown RBP27.28■■□□□ 1.96
CDK8-205ENST00000536792 BICRAQ9NZM4 1560 aa27.27■■□□□ 1.96
CDK8-205ENST00000536792 PELP1Q8IZL8 1130 aaKnown RBP27.2■■□□□ 1.95
CDK8-205ENST00000536792 CECR2Q9BXF3 1484 aa27.13■■□□□ 1.93
CDK8-205ENST00000536792 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
CDK8-205ENST00000536792 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
CDK8-205ENST00000536792 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
CDK8-205ENST00000536792 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
CDK8-205ENST00000536792 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
CDK8-205ENST00000536792 SMARCA4P51532 1647 aa26.64■■□□□ 1.86
CDK8-205ENST00000536792 WIZO95785 1651 aa26.64■■□□□ 1.85
CDK8-205ENST00000536792 SCAF1Q9H7N4 1312 aaKnown RBP26.54■■□□□ 1.84
CDK8-205ENST00000536792 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
CDK8-205ENST00000536792 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
CDK8-205ENST00000536792 MYT1Q01538 1121 aa26.2■■□□□ 1.78
CDK8-205ENST00000536792 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
CDK8-205ENST00000536792 TOP2AP11388 1531 aaKnown RBP26.17■■□□□ 1.78
CDK8-205ENST00000536792 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
CDK8-205ENST00000536792 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
CDK8-205ENST00000536792 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
CDK8-205ENST00000536792 LOC105371045A0A1W2PR82 267 aa26.11■■□□□ 1.77
CDK8-205ENST00000536792 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
CDK8-205ENST00000536792 CCDC88BA6NC98 1476 aa26.05■■□□□ 1.76
CDK8-205ENST00000536792 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
CDK8-205ENST00000536792 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
CDK8-205ENST00000536792 TRIM26Q12899 539 aaPredicted RBP25.69■■□□□ 1.7
CDK8-205ENST00000536792 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
CDK8-205ENST00000536792 TRIM41Q8WV44 630 aa25.58■■□□□ 1.68
CDK8-205ENST00000536792 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
CDK8-205ENST00000536792 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
CDK8-205ENST00000536792 GTF3C3Q9Y5Q9 886 aa25.52■■□□□ 1.68
CDK8-205ENST00000536792 NESP48681 1621 aa25.52■■□□□ 1.68
CDK8-205ENST00000536792 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
CDK8-205ENST00000536792 CFTRP13569 1480 aa25.42■■□□□ 1.66
CDK8-205ENST00000536792 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
CDK8-205ENST00000536792 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
CDK8-205ENST00000536792 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
CDK8-205ENST00000536792 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
CDK8-205ENST00000536792 SYNJ1O43426 1573 aa25.2■■□□□ 1.63
CDK8-205ENST00000536792 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
CDK8-205ENST00000536792 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
CDK8-205ENST00000536792 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
CDK8-205ENST00000536792 CUX1P39880 1505 aa25.09■■□□□ 1.61
CDK8-205ENST00000536792 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
CDK8-205ENST00000536792 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
CDK8-205ENST00000536792 SOGA1O94964 1423 aa25.03■■□□□ 1.6
CDK8-205ENST00000536792 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
CDK8-205ENST00000536792 CENPBP07199 599 aaPredicted RBP25■■□□□ 1.59
CDK8-205ENST00000536792 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
CDK8-205ENST00000536792 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
CDK8-205ENST00000536792 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
CDK8-205ENST00000536792 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
CDK8-205ENST00000536792 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
CDK8-205ENST00000536792 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
CDK8-205ENST00000536792 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
CDK8-205ENST00000536792 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
CDK8-205ENST00000536792 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
CDK8-205ENST00000536792 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
CDK8-205ENST00000536792 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
CDK8-205ENST00000536792 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
CDK8-205ENST00000536792 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
CDK8-205ENST00000536792 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
CDK8-205ENST00000536792 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
CDK8-205ENST00000536792 CUX2O14529 1486 aa24.7■■□□□ 1.54
CDK8-205ENST00000536792 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
CDK8-205ENST00000536792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
CDK8-205ENST00000536792 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
CDK8-205ENST00000536792 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
CDK8-205ENST00000536792 KIF27Q86VH2 1401 aa24.58■■□□□ 1.53
CDK8-205ENST00000536792 WDR62O43379 1518 aa24.57■■□□□ 1.52
CDK8-205ENST00000536792 CCER1Q8TC90 406 aaPredicted RBP24.55■■□□□ 1.52
CDK8-205ENST00000536792 CEP162Q5TB80 1403 aa24.54■■□□□ 1.52
CDK8-205ENST00000536792 EEA1Q15075 1411 aa24.54■■□□□ 1.52
CDK8-205ENST00000536792 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
CDK8-205ENST00000536792 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
CDK8-205ENST00000536792 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
CDK8-205ENST00000536792 PRKCSHP14314 528 aaPredicted RBP24.5■■□□□ 1.51
CDK8-205ENST00000536792 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
CDK8-205ENST00000536792 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.51
CDK8-205ENST00000536792 IGF1RP08069 1367 aa24.48■■□□□ 1.51
CDK8-205ENST00000536792 TNIKQ9UKE5 1360 aa24.47■■□□□ 1.51
CDK8-205ENST00000536792 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
CDK8-205ENST00000536792 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
CDK8-205ENST00000536792 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
CDK8-205ENST00000536792 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms