RNA–Protein interactions for RNA: ENST00000536012.5

CCAR1-207, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-207ENST00000536012 NOLC1Q14978 699 aaKnown RBP eCLIP8.91□□□□□ -0.981e-323■■■■■ 127
CCAR1-207ENST00000536012 AATFQ9NY61 560 aaKnown RBP eCLIP8.02□□□□□ -1.131e-323■■■■■ 89.6
CCAR1-207ENST00000536012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.95□□□□□ -1.143e-16■■■■■ 87.4
CCAR1-207ENST00000536012 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.78□□□□□ -1.161e-35■■■■■ 68.5
CCAR1-207ENST00000536012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.111e-8■■■■■ 46.5
CCAR1-207ENST00000536012 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.686e-9■■■■■ 43.5
CCAR1-207ENST00000536012 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■■■■ 42.4
CCAR1-207ENST00000536012 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.46□□□□□ -1.222e-14■■■■■ 38.5
CCAR1-207ENST00000536012 TARDBPQ13148 414 aaKnown RBP eCLIP7.38□□□□□ -1.235e-8■■■■■ 30.7
CCAR1-207ENST00000536012 TRA2AQ13595 282 aaKnown RBP eCLIP6.65□□□□□ -1.342e-7■■■■■ 29.5
CCAR1-207ENST00000536012 NCBP2P52298 156 aaKnown RBP eCLIP6.37□□□□□ -1.393e-6■■■■■ 27.8
CCAR1-207ENST00000536012 AQRO60306 1485 aaKnown RBP eCLIP9.18□□□□□ -0.947e-7■■■■■ 27.3
CCAR1-207ENST00000536012 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.83□□□□□ -1.643e-8■■■■■ 27
CCAR1-207ENST00000536012 DKC1O60832 514 aaKnown RBP eCLIP7.68□□□□□ -1.181e-323■■■■□ 25.7
CCAR1-207ENST00000536012 SF3B4Q15427 424 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■■■□ 25.6
CCAR1-207ENST00000536012 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.01□□□□□ -1.291e-6■■■■□ 24.8
CCAR1-207ENST00000536012 MATR3P43243 847 aaKnown RBP eCLIP7.93□□□□□ -1.149e-7■■■■□ 23.5
CCAR1-207ENST00000536012 EFTUD2Q15029 972 aaKnown RBP eCLIP7.63□□□□□ -1.195e-7■■■■□ 22.7
CCAR1-207ENST00000536012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.17□□□□□ -1.15e-8■■■■□ 22.3
CCAR1-207ENST00000536012 U2AF2P26368 475 aaKnown RBP eCLIP8.95□□□□□ -0.982e-8■■■■□ 21.9
CCAR1-207ENST00000536012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.22□□□□□ -1.252e-7■■■■□ 21.5
CCAR1-207ENST00000536012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.18□□□□□ -1.12e-7■■■■□ 21.4
CCAR1-207ENST00000536012 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.17e-11■■■■□ 21.3
CCAR1-207ENST00000536012 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.69□□□□□ -1.185e-7■■■□□ 18.9
CCAR1-207ENST00000536012 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■□□ 18.8
CCAR1-207ENST00000536012 ILF3Q12906 894 aaKnown RBP eCLIP6.82□□□□□ -1.322e-7■■■□□ 18
CCAR1-207ENST00000536012 KHSRPQ92945 711 aaKnown RBP eCLIP6.93□□□□□ -1.39e-8■■■□□ 17.7
CCAR1-207ENST00000536012 ZNF622Q969S3 477 aaKnown RBP eCLIP8.89□□□□□ -0.991e-9■■■□□ 17.7
CCAR1-207ENST00000536012 NONOQ15233 471 aaKnown RBP eCLIP7.64□□□□□ -1.196e-7■■■□□ 17.7
CCAR1-207ENST00000536012 U2AF1Q01081 240 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■■■□□ 17.4
CCAR1-207ENST00000536012 TIAL1Q01085 375 aaKnown RBP eCLIP6.85□□□□□ -1.316e-7■■■□□ 17.1
CCAR1-207ENST00000536012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.51□□□□□ -1.052e-8■■■□□ 16.2
CCAR1-207ENST00000536012 SRSF1Q07955 248 aaKnown RBP eCLIP5.89□□□□□ -1.473e-7■■■□□ 15.8
CCAR1-207ENST00000536012 RBFOX2O43251 390 aaKnown RBP eCLIP6.29□□□□□ -1.42e-12■■■□□ 15.2
CCAR1-207ENST00000536012 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.61□□□□□ -1.036e-73■■■□□ 14.8
CCAR1-207ENST00000536012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.1□□□□□ -1.113e-6■■■□□ 14.8
CCAR1-207ENST00000536012 QKIQ96PU8 341 aaKnown RBP eCLIP7.05□□□□□ -1.282e-7■■■□□ 14.7
CCAR1-207ENST00000536012 TIA1P31483 386 aaKnown RBP eCLIP6.56□□□□□ -1.361e-6■■□□□ 14.5
CCAR1-207ENST00000536012 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.86□□□□□ -1.319e-12■■□□□ 14.4
CCAR1-207ENST00000536012 SF3A3Q12874 501 aaKnown RBP eCLIP7.86□□□□□ -1.154e-8■■□□□ 14.3
CCAR1-207ENST00000536012 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.49□□□□□ -1.211e-28■■□□□ 13.4
CCAR1-207ENST00000536012 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.53□□□□□ -1.29e-8■■□□□ 13.3
CCAR1-207ENST00000536012 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.175e-6■■□□□ 13.2
CCAR1-207ENST00000536012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.44□□□□□ -1.062e-7■■□□□ 13
CCAR1-207ENST00000536012 SRSF7Q16629 238 aaKnown RBP eCLIP6.16□□□□□ -1.422e-6■■□□□ 12.9
CCAR1-207ENST00000536012 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.37□□□□□ -1.232e-6■■□□□ 12.2
CCAR1-207ENST00000536012 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.01□□□□□ -1.133e-8■■□□□ 11.6
CCAR1-207ENST00000536012 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.224e-7■■□□□ 11.5
CCAR1-207ENST00000536012 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.223e-9■□□□□ 10.7
CCAR1-207ENST00000536012 CPSF6Q16630 551 aaKnown RBP eCLIP6.67□□□□□ -1.344e-9■□□□□ 10.7
CCAR1-207ENST00000536012 PTBP1P26599 531 aaKnown RBP eCLIP6.99□□□□□ -1.293e-8■□□□□ 10.5
CCAR1-207ENST00000536012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.92□□□□□ -0.984e-7■□□□□ 10.3
CCAR1-207ENST00000536012 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.147e-20■□□□□ 10.3
CCAR1-207ENST00000536012 HNRNPLP14866 589 aaKnown RBP eCLIP7.08□□□□□ -1.285e-24■□□□□ 10.2
CCAR1-207ENST00000536012 PUM1Q14671 1186 aaKnown RBP eCLIP6.99□□□□□ -1.292e-10■□□□□ 10.1
CCAR1-207ENST00000536012 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.09□□□□□ -1.275e-22■□□□□ 10
CCAR1-207ENST00000536012 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.21□□□□□ -1.265e-11■□□□□ 9.6
CCAR1-207ENST00000536012 XRCC6P12956 609 aaKnown RBP eCLIP9.46□□□□□ -0.92e-23■□□□□ 9.3
CCAR1-207ENST00000536012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■□□□□ 9.3
CCAR1-207ENST00000536012 PPIGQ13427 754 aaKnown RBP eCLIP6.86□□□□□ -1.313e-8■□□□□ 9
CCAR1-207ENST00000536012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.42□□□□□ -1.223e-10■□□□□ 8.9
CCAR1-207ENST00000536012 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.223e-24■□□□□ 8.6
CCAR1-207ENST00000536012 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.18□□□□□ -1.427e-7■□□□□ 8.4
CCAR1-207ENST00000536012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.63□□□□□ -1.197e-6■□□□□ 8.3
Retrieved 64 of 64 RNA–protein pairs in 54.9 ms