RNA–Protein interactions for RNA: ENST00000534717.5

RHOC-219, Transcript of ras homolog family member C, humanhuman

TSL 3

Gene RHOC, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOC-219ENST00000534717 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
RHOC-219ENST00000534717 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
RHOC-219ENST00000534717 ABCC9O60706 1549 aa32.21■■■□□ 2.75
RHOC-219ENST00000534717 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
RHOC-219ENST00000534717 NACADO15069 1562 aa30.71■■■□□ 2.51
RHOC-219ENST00000534717 DCAF8L2P0C7V8 631 aa30.43■■■□□ 2.46
RHOC-219ENST00000534717 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
RHOC-219ENST00000534717 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
RHOC-219ENST00000534717 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
RHOC-219ENST00000534717 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
RHOC-219ENST00000534717 PABPN1Q86U42 306 aaKnown RBP eCLIP29.97■■■□□ 2.39
RHOC-219ENST00000534717 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
RHOC-219ENST00000534717 BICRAQ9NZM4 1560 aa29.91■■■□□ 2.38
RHOC-219ENST00000534717 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
RHOC-219ENST00000534717 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.34
RHOC-219ENST00000534717 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
RHOC-219ENST00000534717 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
RHOC-219ENST00000534717 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
RHOC-219ENST00000534717 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
RHOC-219ENST00000534717 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
RHOC-219ENST00000534717 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
RHOC-219ENST00000534717 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
RHOC-219ENST00000534717 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
RHOC-219ENST00000534717 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
RHOC-219ENST00000534717 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
RHOC-219ENST00000534717 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
RHOC-219ENST00000534717 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
RHOC-219ENST00000534717 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
RHOC-219ENST00000534717 ERCC6Q03468 1493 aa27.83■■■□□ 2.04
RHOC-219ENST00000534717 NESP48681 1621 aa27.74■■■□□ 2.03
RHOC-219ENST00000534717 CUX2O14529 1486 aa27.73■■■□□ 2.03
RHOC-219ENST00000534717 WIZO95785 1651 aa27.68■■■□□ 2.02
RHOC-219ENST00000534717 LAMC3Q9Y6N6 1575 aa27.67■■■□□ 2.02
RHOC-219ENST00000534717 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
RHOC-219ENST00000534717 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
RHOC-219ENST00000534717 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
RHOC-219ENST00000534717 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
RHOC-219ENST00000534717 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
RHOC-219ENST00000534717 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
RHOC-219ENST00000534717 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
RHOC-219ENST00000534717 CFTRP13569 1480 aa27.22■■□□□ 1.95
RHOC-219ENST00000534717 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
RHOC-219ENST00000534717 WDR62O43379 1518 aa27.17■■□□□ 1.94
RHOC-219ENST00000534717 FANCD2Q9BXW9 1451 aa27.16■■□□□ 1.94
RHOC-219ENST00000534717 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
RHOC-219ENST00000534717 PRDM2Q13029 1718 aa27.03■■□□□ 1.92
RHOC-219ENST00000534717 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
RHOC-219ENST00000534717 TOPBP1Q92547 1522 aa26.68■■□□□ 1.86
RHOC-219ENST00000534717 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
RHOC-219ENST00000534717 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
RHOC-219ENST00000534717 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
RHOC-219ENST00000534717 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
RHOC-219ENST00000534717 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
RHOC-219ENST00000534717 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
RHOC-219ENST00000534717 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
RHOC-219ENST00000534717 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
RHOC-219ENST00000534717 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
RHOC-219ENST00000534717 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
RHOC-219ENST00000534717 CUX1P39880 1505 aa26.31■■□□□ 1.8
RHOC-219ENST00000534717 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
RHOC-219ENST00000534717 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.88e-8■■■■□ 26
RHOC-219ENST00000534717 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
RHOC-219ENST00000534717 SOGA1O94964 1423 aa26.27■■□□□ 1.8
RHOC-219ENST00000534717 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
RHOC-219ENST00000534717 CHD1O14646 1710 aa26.17■■□□□ 1.78
RHOC-219ENST00000534717 TDRD9Q8NDG6 1382 aaKnown RBP26.16■■□□□ 1.78
RHOC-219ENST00000534717 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
RHOC-219ENST00000534717 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
RHOC-219ENST00000534717 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
RHOC-219ENST00000534717 SNAPC4Q5SXM2 1469 aa26.08■■□□□ 1.77
RHOC-219ENST00000534717 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
RHOC-219ENST00000534717 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
RHOC-219ENST00000534717 ARHGEF11O15085 1522 aa26.05■■□□□ 1.76
RHOC-219ENST00000534717 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
RHOC-219ENST00000534717 FBLN2P98095 1184 aa26.02■■□□□ 1.76
RHOC-219ENST00000534717 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
RHOC-219ENST00000534717 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
RHOC-219ENST00000534717 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
RHOC-219ENST00000534717 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
RHOC-219ENST00000534717 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
RHOC-219ENST00000534717 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
RHOC-219ENST00000534717 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
RHOC-219ENST00000534717 SYNJ2O15056 1496 aa25.94■■□□□ 1.74
RHOC-219ENST00000534717 CLASP1Q7Z460 1538 aa25.9■■□□□ 1.74
RHOC-219ENST00000534717 CHMP7Q8WUX9 453 aaPredicted RBP25.9■■□□□ 1.74
RHOC-219ENST00000534717 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
RHOC-219ENST00000534717 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
RHOC-219ENST00000534717 CYB5RLQ6IPT4 315 aa25.74■■□□□ 1.71
RHOC-219ENST00000534717 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
RHOC-219ENST00000534717 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
RHOC-219ENST00000534717 FHAD1B1AJZ9 1412 aa25.68■■□□□ 1.7
RHOC-219ENST00000534717 NUP160Q12769 1436 aa25.63■■□□□ 1.69
RHOC-219ENST00000534717 CEP170Q5SW79 1584 aa25.61■■□□□ 1.69
RHOC-219ENST00000534717 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
RHOC-219ENST00000534717 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
RHOC-219ENST00000534717 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
RHOC-219ENST00000534717 CUL7Q14999 1698 aa25.42■■□□□ 1.66
RHOC-219ENST00000534717 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
RHOC-219ENST00000534717 IGF1RP08069 1367 aa25.38■■□□□ 1.65
RHOC-219ENST00000534717 TRHP20396 242 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms