RNA–Protein interactions for RNA: ENST00000534624.5

HSPA8-224, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA8, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-224ENST00000534624 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.38■□□□□ 0.215e-76■□□□□ 9.6
HSPA8-224ENST00000534624 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.032e-70■■□□□ 12.7
HSPA8-224ENST00000534624 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.295e-66■□□□□ 10.9
HSPA8-224ENST00000534624 DKC1O60832 514 aaKnown RBP eCLIP18.85■□□□□ 0.611e-61■□□□□ 10.4
HSPA8-224ENST00000534624 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.223e-47■□□□□ 11.2
HSPA8-224ENST00000534624 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.481e-45■■■■□ 25.2
HSPA8-224ENST00000534624 TROVE2P10155 538 aaKnown RBP eCLIP17.41■□□□□ 0.384e-40■□□□□ 10
HSPA8-224ENST00000534624 AATFQ9NY61 560 aaKnown RBP eCLIP20.29■□□□□ 0.841e-38■■■□□ 19.2
HSPA8-224ENST00000534624 PTBP1P26599 531 aaKnown RBP eCLIP15.25■□□□□ 0.035e-37■□□□□ 10.7
HSPA8-224ENST00000534624 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.233e-35■■■■■ 27.3
HSPA8-224ENST00000534624 TRA2AQ13595 282 aaKnown RBP eCLIP15.69■□□□□ 0.11e-32■■■■■ 68.5
HSPA8-224ENST00000534624 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.14■□□□□ 0.345e-27■□□□□ 10.8
HSPA8-224ENST00000534624 DDX3XO00571 662 aaKnown RBP eCLIP18.7■□□□□ 0.581e-26■□□□□ 10.7
HSPA8-224ENST00000534624 NIP7Q9Y221 180 aaKnown RBP eCLIP20.84■□□□□ 0.933e-26■□□□□ 9.3
HSPA8-224ENST00000534624 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.02■□□□□ 0.641e-23■■□□□ 11.8
HSPA8-224ENST00000534624 SND1Q7KZF4 910 aaKnown RBP eCLIP18.35■□□□□ 0.531e-21■■□□□ 13.8
HSPA8-224ENST00000534624 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.42■□□□□ 0.541e-20■□□□□ 10.4
HSPA8-224ENST00000534624 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.53■□□□□ 0.082e-16■■□□□ 12.1
HSPA8-224ENST00000534624 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.824e-16■□□□□ 8.7
HSPA8-224ENST00000534624 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.14■□□□□ 0.655e-16■■■□□ 15.7
HSPA8-224ENST00000534624 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.52■□□□□ 0.239e-16■■■□□ 15.3
HSPA8-224ENST00000534624 EIF3DO15371 548 aaKnown RBP eCLIP18.96■□□□□ 0.632e-15■□□□□ 8.2
HSPA8-224ENST00000534624 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.675e-15■□□□□ 11.3
HSPA8-224ENST00000534624 EFTUD2Q15029 972 aaKnown RBP eCLIP17.83■□□□□ 0.449e-13■■■■■ 38
HSPA8-224ENST00000534624 FMR1Q06787 632 aaKnown RBP eCLIP19.53■□□□□ 0.725e-12■■■□□ 15.7
HSPA8-224ENST00000534624 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.78■□□□□ 0.444e-11■■■□□ 18.4
HSPA8-224ENST00000534624 U2AF2P26368 475 aaKnown RBP eCLIP19.95■□□□□ 0.787e-11■■■■□ 20.6
HSPA8-224ENST00000534624 NOLC1Q14978 699 aaKnown RBP eCLIP19.43■□□□□ 0.77e-11■■■■□ 25.5
HSPA8-224ENST00000534624 RPS3P23396 243 aaKnown RBP eCLIP17.03■□□□□ 0.329e-11■■■■□ 24.7
HSPA8-224ENST00000534624 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.14■□□□□ 0.491e-10■■■■■ 47.2
HSPA8-224ENST00000534624 ZRANB2O95218 330 aaKnown RBP eCLIP18.5■□□□□ 0.551e-10■■■■■ 40
HSPA8-224ENST00000534624 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.245e-10■□□□□ 10.8
HSPA8-224ENST00000534624 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.39■□□□□ 0.377e-10■□□□□ 10.3
HSPA8-224ENST00000534624 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.077e-10■■■■■ 33.4
HSPA8-224ENST00000534624 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.8■□□□□ 0.442e-9■■□□□ 13.3
HSPA8-224ENST00000534624 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.72e-9■■□□□ 13.7
HSPA8-224ENST00000534624 NIPBLQ6KC79 2804 aaeCLIP13□□□□□ -0.333e-9■■■□□ 18.6
HSPA8-224ENST00000534624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.6■■□□□ 1.533e-9■■■■□ 26.4
HSPA8-224ENST00000534624 CDC40O60508 579 aaKnown RBP eCLIP15.73■□□□□ 0.112e-8■■□□□ 13.2
HSPA8-224ENST00000534624 G3BP1Q13283 466 aaKnown RBP eCLIP21.16■□□□□ 0.982e-8■■■□□ 16.7
HSPA8-224ENST00000534624 FXR1P51114 621 aaKnown RBP eCLIP19.18■□□□□ 0.662e-8■■■□□ 16.6
HSPA8-224ENST00000534624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.6■■□□□ 1.053e-8■■■■□ 22.2
HSPA8-224ENST00000534624 PUM1Q14671 1186 aaKnown RBP eCLIP16.24■□□□□ 0.193e-8■□□□□ 10.6
HSPA8-224ENST00000534624 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.846e-8■■■■□ 23.2
HSPA8-224ENST00000534624 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.216e-8■■■■■ 41.2
HSPA8-224ENST00000534624 EIF3HO15372 352 aaKnown RBP eCLIP17.87■□□□□ 0.456e-8■□□□□ 9.5
HSPA8-224ENST00000534624 LARP4Q71RC2 724 aaKnown RBP eCLIP16.98■□□□□ 0.317e-8■■□□□ 14
HSPA8-224ENST00000534624 SLBPQ14493 270 aaKnown RBP eCLIP16.68■□□□□ 0.268e-8■□□□□ 9
HSPA8-224ENST00000534624 RBM15Q96T37 977 aaKnown RBP eCLIP17.97■□□□□ 0.479e-8■■■■□ 26.5
HSPA8-224ENST00000534624 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.611e-7■■■■■ 37.9
HSPA8-224ENST00000534624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.581e-7■■□□□ 12.6
HSPA8-224ENST00000534624 SF3B4Q15427 424 aaKnown RBP eCLIP14.87□□□□□ -0.032e-7■■■■□ 24.8
HSPA8-224ENST00000534624 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.822e-7■□□□□ 8.6
HSPA8-224ENST00000534624 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18■□□□□ 0.473e-7■□□□□ 9
HSPA8-224ENST00000534624 SF3B1O75533 1304 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■■ 31
HSPA8-224ENST00000534624 EIF3GO75821 320 aaKnown RBP eCLIP14.05□□□□□ -0.164e-7■□□□□ 9.6
HSPA8-224ENST00000534624 SUB1P53999 127 aaKnown RBP eCLIP13.78□□□□□ -0.25e-7■■□□□ 12.9
HSPA8-224ENST00000534624 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.346e-7■■■□□ 17.1
HSPA8-224ENST00000534624 RBM22Q9NW64 420 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■■ 34.9
HSPA8-224ENST00000534624 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.832e-6■□□□□ 11.2
HSPA8-224ENST00000534624 AARSP49588 968 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■□□□□ 10.9
HSPA8-224ENST00000534624 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.26■□□□□ 0.513e-6■□□□□ 10.3
HSPA8-224ENST00000534624 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.17■□□□□ 0.663e-6■■■■■ 38.3
HSPA8-224ENST00000534624 IGF2BP3O00425 579 aaKnown RBP eCLIP18.64■□□□□ 0.573e-6■■■■□ 24.5
HSPA8-224ENST00000534624 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■■■■□ 21.4
HSPA8-224ENST00000534624 PRPF4O43172 522 aaKnown RBP eCLIP17.63■□□□□ 0.413e-6■■□□□ 11.8
HSPA8-224ENST00000534624 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.12■□□□□ 0.334e-6■■■■■ 48.1
Retrieved 67 of 67 RNA–protein pairs in 15.2 ms