RNA–Protein interactions for RNA: ENST00000534558.5

RELA-225, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-225ENST00000534558 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
RELA-225ENST00000534558 ABCC9O60706 1549 aa30.71■■■□□ 2.51
RELA-225ENST00000534558 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
RELA-225ENST00000534558 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
RELA-225ENST00000534558 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
RELA-225ENST00000534558 NACADO15069 1562 aa28.98■■■□□ 2.23
RELA-225ENST00000534558 DNAJC5BQ9UF47 199 aa28.77■■■□□ 2.2
RELA-225ENST00000534558 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
RELA-225ENST00000534558 UNC13AQ9UPW8 1703 aa28.59■■■□□ 2.17
RELA-225ENST00000534558 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
RELA-225ENST00000534558 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
RELA-225ENST00000534558 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
RELA-225ENST00000534558 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
RELA-225ENST00000534558 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
RELA-225ENST00000534558 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
RELA-225ENST00000534558 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
RELA-225ENST00000534558 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
RELA-225ENST00000534558 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
RELA-225ENST00000534558 NCAPD3P42695 1498 aa26.75■■□□□ 1.87
RELA-225ENST00000534558 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
RELA-225ENST00000534558 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
RELA-225ENST00000534558 SMARCA2P51531 1590 aa26.62■■□□□ 1.85
RELA-225ENST00000534558 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
RELA-225ENST00000534558 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
RELA-225ENST00000534558 ERCC6Q03468 1493 aa26.5■■□□□ 1.83
RELA-225ENST00000534558 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
RELA-225ENST00000534558 NESP48681 1621 aa26.39■■□□□ 1.81
RELA-225ENST00000534558 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
RELA-225ENST00000534558 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
RELA-225ENST00000534558 CUX2O14529 1486 aa26.38■■□□□ 1.81
RELA-225ENST00000534558 DNAJC5Q9H3Z4 198 aa26.37■■□□□ 1.81
RELA-225ENST00000534558 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
RELA-225ENST00000534558 WIZO95785 1651 aa26.09■■□□□ 1.77
RELA-225ENST00000534558 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
RELA-225ENST00000534558 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
RELA-225ENST00000534558 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
RELA-225ENST00000534558 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
RELA-225ENST00000534558 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
RELA-225ENST00000534558 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
RELA-225ENST00000534558 WDR62O43379 1518 aa25.72■■□□□ 1.71
RELA-225ENST00000534558 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
RELA-225ENST00000534558 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
RELA-225ENST00000534558 FANCD2Q9BXW9 1451 aa25.69■■□□□ 1.7
RELA-225ENST00000534558 CFTRP13569 1480 aa25.66■■□□□ 1.7
RELA-225ENST00000534558 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
RELA-225ENST00000534558 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
RELA-225ENST00000534558 CCDC88BA6NC98 1476 aa25.45■■□□□ 1.66
RELA-225ENST00000534558 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
RELA-225ENST00000534558 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
RELA-225ENST00000534558 TOPBP1Q92547 1522 aa25.2■■□□□ 1.62
RELA-225ENST00000534558 IFT140Q96RY7 1462 aa25.18■■□□□ 1.62
RELA-225ENST00000534558 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
RELA-225ENST00000534558 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
RELA-225ENST00000534558 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
RELA-225ENST00000534558 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
RELA-225ENST00000534558 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
RELA-225ENST00000534558 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.591e-9■■■■■ 31.1
RELA-225ENST00000534558 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
RELA-225ENST00000534558 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
RELA-225ENST00000534558 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
RELA-225ENST00000534558 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
RELA-225ENST00000534558 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
RELA-225ENST00000534558 CHD1O14646 1710 aa24.86■■□□□ 1.57
RELA-225ENST00000534558 SOGA1O94964 1423 aa24.85■■□□□ 1.57
RELA-225ENST00000534558 FBLN2P98095 1184 aa24.83■■□□□ 1.57
RELA-225ENST00000534558 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
RELA-225ENST00000534558 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
RELA-225ENST00000534558 TDRD9Q8NDG6 1382 aaKnown RBP24.81■■□□□ 1.56
RELA-225ENST00000534558 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
RELA-225ENST00000534558 CUX1P39880 1505 aa24.79■■□□□ 1.56
RELA-225ENST00000534558 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
RELA-225ENST00000534558 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
RELA-225ENST00000534558 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
RELA-225ENST00000534558 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
RELA-225ENST00000534558 GRIN2BQ13224 1484 aa24.61■■□□□ 1.53
RELA-225ENST00000534558 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
RELA-225ENST00000534558 ARAP1Q96P48 1450 aa24.58■■□□□ 1.52
RELA-225ENST00000534558 PBRM1Q86U86 1689 aa24.54■■□□□ 1.52
RELA-225ENST00000534558 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
RELA-225ENST00000534558 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
RELA-225ENST00000534558 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
RELA-225ENST00000534558 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
RELA-225ENST00000534558 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
RELA-225ENST00000534558 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
RELA-225ENST00000534558 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
RELA-225ENST00000534558 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
RELA-225ENST00000534558 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
RELA-225ENST00000534558 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
RELA-225ENST00000534558 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
RELA-225ENST00000534558 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
RELA-225ENST00000534558 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
RELA-225ENST00000534558 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
RELA-225ENST00000534558 NUP160Q12769 1436 aa24.19■■□□□ 1.46
RELA-225ENST00000534558 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
RELA-225ENST00000534558 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
RELA-225ENST00000534558 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
RELA-225ENST00000534558 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
RELA-225ENST00000534558 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
RELA-225ENST00000534558 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
RELA-225ENST00000534558 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms