RNA–Protein interactions for RNA: ENST00000533554.1

TTC17-213, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 3

Gene TTC17, Length 396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-213ENST00000533554 AEBP2Q6ZN18 517 aaPredicted RBP30.03■■■□□ 2.4
TTC17-213ENST00000533554 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
TTC17-213ENST00000533554 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
TTC17-213ENST00000533554 SENP3Q9H4L4 574 aaPredicted RBP25.26■■□□□ 1.63
TTC17-213ENST00000533554 FOXD1Q16676 465 aa23.68■■□□□ 1.38
TTC17-213ENST00000533554 PLPPR3Q6T4P5 718 aa23.16■■□□□ 1.3
TTC17-213ENST00000533554 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
TTC17-213ENST00000533554 ADRA2BP18089 450 aa22.54■■□□□ 1.2
TTC17-213ENST00000533554 PIAS4Q8N2W9 510 aaPredicted RBP22.13■■□□□ 1.13
TTC17-213ENST00000533554 MSH5O43196 834 aa21.74■■□□□ 1.07
TTC17-213ENST00000533554 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
TTC17-213ENST00000533554 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
TTC17-213ENST00000533554 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
TTC17-213ENST00000533554 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
TTC17-213ENST00000533554 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
TTC17-213ENST00000533554 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
TTC17-213ENST00000533554 KCNA4P22459 653 aa19.69■□□□□ 0.74
TTC17-213ENST00000533554 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
TTC17-213ENST00000533554 HOXD11P31277 338 aaPredicted RBP19.65■□□□□ 0.74
TTC17-213ENST00000533554 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
TTC17-213ENST00000533554 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
TTC17-213ENST00000533554 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
TTC17-213ENST00000533554 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
TTC17-213ENST00000533554 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
TTC17-213ENST00000533554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.586e-6■■■□□ 19.2
TTC17-213ENST00000533554 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
TTC17-213ENST00000533554 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
TTC17-213ENST00000533554 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
TTC17-213ENST00000533554 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
TTC17-213ENST00000533554 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
TTC17-213ENST00000533554 ZBTB22O15209 634 aa18.18■□□□□ 0.5
TTC17-213ENST00000533554 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
TTC17-213ENST00000533554 FOXD4L1Q9NU39 408 aa18.06■□□□□ 0.48
TTC17-213ENST00000533554 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
TTC17-213ENST00000533554 CAPN15O75808 1086 aa17.88■□□□□ 0.45
TTC17-213ENST00000533554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
TTC17-213ENST00000533554 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
TTC17-213ENST00000533554 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
TTC17-213ENST00000533554 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
TTC17-213ENST00000533554 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
TTC17-213ENST00000533554 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
TTC17-213ENST00000533554 DSG3P32926 999 aa17.73■□□□□ 0.43
TTC17-213ENST00000533554 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
TTC17-213ENST00000533554 APLP2Q06481 763 aa17.63■□□□□ 0.41
TTC17-213ENST00000533554 ABCB7O75027 752 aa17.6■□□□□ 0.41
TTC17-213ENST00000533554 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
TTC17-213ENST00000533554 POLA2Q14181 598 aa17.42■□□□□ 0.38
TTC17-213ENST00000533554 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
TTC17-213ENST00000533554 MKRN4PQ13434 485 aaPredicted RBP16.93■□□□□ 0.3
TTC17-213ENST00000533554 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
TTC17-213ENST00000533554 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
TTC17-213ENST00000533554 FBLN2P98095 1184 aa16.72■□□□□ 0.27
TTC17-213ENST00000533554 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
TTC17-213ENST00000533554 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
TTC17-213ENST00000533554 SPDYE2BA6NHP3 402 aa16.49■□□□□ 0.23
TTC17-213ENST00000533554 SPDYE6P0CI01 402 aa16.49■□□□□ 0.23
TTC17-213ENST00000533554 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
TTC17-213ENST00000533554 REM2Q8IYK8 340 aaPredicted RBP16.45■□□□□ 0.22
TTC17-213ENST00000533554 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
TTC17-213ENST00000533554 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
TTC17-213ENST00000533554 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
TTC17-213ENST00000533554 CHRDL2Q6WN34 429 aa16.27■□□□□ 0.2
TTC17-213ENST00000533554 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
TTC17-213ENST00000533554 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
TTC17-213ENST00000533554 POTEHQ6S545 545 aa16.18■□□□□ 0.18
TTC17-213ENST00000533554 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
TTC17-213ENST00000533554 SPDYE1Q8NFV5 336 aaPredicted RBP16.07■□□□□ 0.16
TTC17-213ENST00000533554 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
TTC17-213ENST00000533554 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
TTC17-213ENST00000533554 FKBP8Q14318 412 aa15.97■□□□□ 0.15
TTC17-213ENST00000533554 PROM2Q8N271 834 aa15.96■□□□□ 0.15
TTC17-213ENST00000533554 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
TTC17-213ENST00000533554 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
TTC17-213ENST00000533554 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
TTC17-213ENST00000533554 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
TTC17-213ENST00000533554 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
TTC17-213ENST00000533554 EVX2Q03828 476 aa15.65■□□□□ 0.1
TTC17-213ENST00000533554 HAX1O00165 279 aa15.58■□□□□ 0.08
TTC17-213ENST00000533554 FARP1Q9Y4F1 1045 aaPredicted RBP15.58■□□□□ 0.08
TTC17-213ENST00000533554 MNX1P50219 401 aaPredicted RBP15.54■□□□□ 0.08
TTC17-213ENST00000533554 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
TTC17-213ENST00000533554 MIER1Q8N108 512 aa15.44■□□□□ 0.06
TTC17-213ENST00000533554 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
TTC17-213ENST00000533554 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
TTC17-213ENST00000533554 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
TTC17-213ENST00000533554 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
TTC17-213ENST00000533554 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
TTC17-213ENST00000533554 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
TTC17-213ENST00000533554 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
TTC17-213ENST00000533554 GABBR2O75899 941 aa15.17■□□□□ 0.02
TTC17-213ENST00000533554 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
TTC17-213ENST00000533554 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
TTC17-213ENST00000533554 NUBP1P53384 320 aa15.15■□□□□ 0.02
TTC17-213ENST00000533554 TSPYL2Q9H2G4 693 aaPredicted RBP15.14■□□□□ 0.01
TTC17-213ENST00000533554 IFNLR1Q8IU57 520 aaPredicted RBP15.13■□□□□ 0.01
TTC17-213ENST00000533554 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
TTC17-213ENST00000533554 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
TTC17-213ENST00000533554 KLHL34Q8N239 644 aa15.04■□□□□ -0
TTC17-213ENST00000533554 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
TTC17-213ENST00000533554 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms