RNA–Protein interactions for RNA: ENST00000533238.5

HSPA8-220, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

TSL 3

Gene HSPA8, Length 465 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-220ENST00000533238 NOLC1Q14978 699 aaKnown RBP eCLIP6.96□□□□□ -1.31e-323■■■■■ 29.4
HSPA8-220ENST00000533238 DKC1O60832 514 aaKnown RBP eCLIP7.16□□□□□ -1.261e-88■□□□□ 11.1
HSPA8-220ENST00000533238 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.12□□□□□ -1.437e-76■□□□□ 9.5
HSPA8-220ENST00000533238 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.12e-70■■□□□ 12.7
HSPA8-220ENST00000533238 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.055e-66■□□□□ 10.9
HSPA8-220ENST00000533238 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.8□□□□□ -1.323e-47■□□□□ 11.2
HSPA8-220ENST00000533238 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.781e-45■■■■□ 25.2
HSPA8-220ENST00000533238 TROVE2P10155 538 aaKnown RBP eCLIP5.91□□□□□ -1.464e-40■□□□□ 10
HSPA8-220ENST00000533238 AATFQ9NY61 560 aaKnown RBP eCLIP7.68□□□□□ -1.182e-38■■■□□ 17.3
HSPA8-220ENST00000533238 PTBP1P26599 531 aaKnown RBP eCLIP5.07□□□□□ -1.65e-37■□□□□ 10.7
HSPA8-220ENST00000533238 SMNDC1O75940 238 aaKnown RBP eCLIP5.69□□□□□ -1.53e-35■■■■■ 31.2
HSPA8-220ENST00000533238 TRA2AQ13595 282 aaKnown RBP eCLIP6.19□□□□□ -1.421e-32■■■■■ 88.4
HSPA8-220ENST00000533238 U2AF1Q01081 240 aaKnown RBP eCLIP8.5□□□□□ -1.051e-28■■□□□ 11.8
HSPA8-220ENST00000533238 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.95□□□□□ -1.465e-27■□□□□ 10.8
HSPA8-220ENST00000533238 DDX3XO00571 662 aaKnown RBP eCLIP6.62□□□□□ -1.351e-26■□□□□ 10.7
HSPA8-220ENST00000533238 NIP7Q9Y221 180 aaKnown RBP eCLIP8.15□□□□□ -1.13e-26■□□□□ 9.3
HSPA8-220ENST00000533238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.83□□□□□ -1.322e-23■■□□□ 13.3
HSPA8-220ENST00000533238 SND1Q7KZF4 910 aaKnown RBP eCLIP6.64□□□□□ -1.351e-21■■■□□ 14.7
HSPA8-220ENST00000533238 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.281e-20■□□□□ 10.4
HSPA8-220ENST00000533238 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.83□□□□□ -1.485e-16■■□□□ 14.1
HSPA8-220ENST00000533238 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.93□□□□□ -1.469e-16■■■□□ 15.3
HSPA8-220ENST00000533238 EIF3DO15371 548 aaKnown RBP eCLIP6.95□□□□□ -1.32e-15■□□□□ 8.2
HSPA8-220ENST00000533238 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.7□□□□□ -1.343e-15■■■□□ 15.4
HSPA8-220ENST00000533238 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.137e-15■■□□□ 11.5
HSPA8-220ENST00000533238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.58□□□□□ -0.886e-14■■■□□ 18.5
HSPA8-220ENST00000533238 EFTUD2Q15029 972 aaKnown RBP eCLIP6.15□□□□□ -1.421e-12■■■■■ 40.8
HSPA8-220ENST00000533238 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.185e-12■■■□□ 16.7
HSPA8-220ENST00000533238 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.44□□□□□ -1.385e-11■■■■□ 19.6
HSPA8-220ENST00000533238 U2AF2P26368 475 aaKnown RBP eCLIP7.2□□□□□ -1.269e-11■■■■□ 23.1
HSPA8-220ENST00000533238 RPS3P23396 243 aaKnown RBP eCLIP6.23□□□□□ -1.419e-11■■■■□ 24.9
HSPA8-220ENST00000533238 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.371e-10■■■■■ 40
HSPA8-220ENST00000533238 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.35□□□□□ -1.397e-10■□□□□ 10.3
HSPA8-220ENST00000533238 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.677e-10■■■■■ 33.4
HSPA8-220ENST00000533238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.02□□□□□ -1.292e-9■■□□□ 13.3
HSPA8-220ENST00000533238 FXR2P51116 673 aaKnown RBP eCLIP7.13□□□□□ -1.273e-9■■□□□ 14.2
HSPA8-220ENST00000533238 NIPBLQ6KC79 2804 aaeCLIP5.36□□□□□ -1.554e-9■■■□□ 16.1
HSPA8-220ENST00000533238 G3BP1Q13283 466 aaKnown RBP eCLIP7.9□□□□□ -1.143e-8■■■□□ 17.1
HSPA8-220ENST00000533238 PUM1Q14671 1186 aaKnown RBP eCLIP6.32□□□□□ -1.43e-8■■□□□ 11.6
HSPA8-220ENST00000533238 FXR1P51114 621 aaKnown RBP eCLIP6.97□□□□□ -1.294e-8■□□□□ 11.3
HSPA8-220ENST00000533238 AQRO60306 1485 aaKnown RBP eCLIP10.76□□□□□ -0.696e-8■■■■□ 24.6
HSPA8-220ENST00000533238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.26□□□□□ -1.576e-8■■■■■ 43.1
HSPA8-220ENST00000533238 SLBPQ14493 270 aaKnown RBP eCLIP6.07□□□□□ -1.448e-8■□□□□ 9
HSPA8-220ENST00000533238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.51□□□□□ -1.059e-8■■■□□ 15
HSPA8-220ENST00000533238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.321e-7■■■■■ 37.9
HSPA8-220ENST00000533238 RBM15Q96T37 977 aaKnown RBP eCLIP6.4□□□□□ -1.381e-7■■■■□ 26.5
HSPA8-220ENST00000533238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.85□□□□□ -0.831e-7■■□□□ 12.6
HSPA8-220ENST00000533238 SF3B4Q15427 424 aaKnown RBP eCLIP5.79□□□□□ -1.482e-7■■■■□ 24.8
HSPA8-220ENST00000533238 SF3B1O75533 1304 aaKnown RBP eCLIP6.89□□□□□ -1.313e-7■■■■■ 31
HSPA8-220ENST00000533238 EIF3GO75821 320 aaKnown RBP eCLIP4.65□□□□□ -1.674e-7■□□□□ 9.6
HSPA8-220ENST00000533238 DDX6P26196 483 aaKnown RBP eCLIP6.72□□□□□ -1.336e-7■■■□□ 17.1
HSPA8-220ENST00000533238 SUB1P53999 127 aaKnown RBP eCLIP4.95□□□□□ -1.627e-7■■□□□ 12.3
HSPA8-220ENST00000533238 METAP2P50579 478 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■□□□□ 11.2
HSPA8-220ENST00000533238 AARSP49588 968 aaKnown RBP eCLIP6.84□□□□□ -1.313e-6■□□□□ 10.9
HSPA8-220ENST00000533238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.53□□□□□ -1.363e-6■□□□□ 10.3
HSPA8-220ENST00000533238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.61□□□□□ -1.193e-6■■■■■ 38.3
HSPA8-220ENST00000533238 IGF2BP3O00425 579 aaKnown RBP eCLIP7.51□□□□□ -1.213e-6■■■■□ 24.5
HSPA8-220ENST00000533238 GRSF1Q12849 480 aaKnown RBP eCLIP6.62□□□□□ -1.353e-6■■■■□ 21.4
HSPA8-220ENST00000533238 PRPF4O43172 522 aaKnown RBP eCLIP6.07□□□□□ -1.443e-6■■□□□ 12.6
Retrieved 58 of 58 RNA–protein pairs in 12.9 ms