RNA–Protein interactions for RNA: ENST00000533157.5

FRG1-207, Transcript of FSHD region gene 1, humanhuman

TSL 5

Gene FRG1, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-207ENST00000533157 NISCHQ9Y2I1 1504 aa22.12■■□□□ 1.13
FRG1-207ENST00000533157 ABCC9O60706 1549 aa19.97■□□□□ 0.79
FRG1-207ENST00000533157 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
FRG1-207ENST00000533157 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
FRG1-207ENST00000533157 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
FRG1-207ENST00000533157 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
FRG1-207ENST00000533157 NACADO15069 1562 aa18.76■□□□□ 0.59
FRG1-207ENST00000533157 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
FRG1-207ENST00000533157 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
FRG1-207ENST00000533157 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
FRG1-207ENST00000533157 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
FRG1-207ENST00000533157 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
FRG1-207ENST00000533157 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
FRG1-207ENST00000533157 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
FRG1-207ENST00000533157 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
FRG1-207ENST00000533157 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
FRG1-207ENST00000533157 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
FRG1-207ENST00000533157 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
FRG1-207ENST00000533157 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
FRG1-207ENST00000533157 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
FRG1-207ENST00000533157 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
FRG1-207ENST00000533157 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
FRG1-207ENST00000533157 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
FRG1-207ENST00000533157 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
FRG1-207ENST00000533157 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
FRG1-207ENST00000533157 CUX2O14529 1486 aa17.18■□□□□ 0.34
FRG1-207ENST00000533157 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
FRG1-207ENST00000533157 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
FRG1-207ENST00000533157 NESP48681 1621 aa17.12■□□□□ 0.33
FRG1-207ENST00000533157 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
FRG1-207ENST00000533157 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
FRG1-207ENST00000533157 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
FRG1-207ENST00000533157 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
FRG1-207ENST00000533157 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
FRG1-207ENST00000533157 THOC2Q8NI27 1593 aaKnown RBP16.86■□□□□ 0.29
FRG1-207ENST00000533157 WIZO95785 1651 aa16.79■□□□□ 0.28
FRG1-207ENST00000533157 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
FRG1-207ENST00000533157 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
FRG1-207ENST00000533157 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
FRG1-207ENST00000533157 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
FRG1-207ENST00000533157 WDR62O43379 1518 aa16.67■□□□□ 0.26
FRG1-207ENST00000533157 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
FRG1-207ENST00000533157 CFTRP13569 1480 aa16.64■□□□□ 0.25
FRG1-207ENST00000533157 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
FRG1-207ENST00000533157 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
FRG1-207ENST00000533157 URB2Q14146 1524 aaKnown RBP16.51■□□□□ 0.23
FRG1-207ENST00000533157 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
FRG1-207ENST00000533157 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
FRG1-207ENST00000533157 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
FRG1-207ENST00000533157 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
FRG1-207ENST00000533157 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
FRG1-207ENST00000533157 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
FRG1-207ENST00000533157 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
FRG1-207ENST00000533157 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
FRG1-207ENST00000533157 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
FRG1-207ENST00000533157 FBLN2P98095 1184 aa16.19■□□□□ 0.18
FRG1-207ENST00000533157 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
FRG1-207ENST00000533157 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
FRG1-207ENST00000533157 SOGA1O94964 1423 aa16.14■□□□□ 0.17
FRG1-207ENST00000533157 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
FRG1-207ENST00000533157 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
FRG1-207ENST00000533157 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
FRG1-207ENST00000533157 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
FRG1-207ENST00000533157 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
FRG1-207ENST00000533157 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
FRG1-207ENST00000533157 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
FRG1-207ENST00000533157 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
FRG1-207ENST00000533157 FGD5Q6ZNL6 1462 aa16.07■□□□□ 0.16
FRG1-207ENST00000533157 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
FRG1-207ENST00000533157 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
FRG1-207ENST00000533157 CUX1P39880 1505 aa16.02■□□□□ 0.15
FRG1-207ENST00000533157 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
FRG1-207ENST00000533157 CHD1O14646 1710 aa15.99■□□□□ 0.15
FRG1-207ENST00000533157 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
FRG1-207ENST00000533157 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
FRG1-207ENST00000533157 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
FRG1-207ENST00000533157 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
FRG1-207ENST00000533157 WDR97A6NE52 1622 aa15.94■□□□□ 0.14
FRG1-207ENST00000533157 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
FRG1-207ENST00000533157 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
FRG1-207ENST00000533157 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
FRG1-207ENST00000533157 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
FRG1-207ENST00000533157 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
FRG1-207ENST00000533157 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
FRG1-207ENST00000533157 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
FRG1-207ENST00000533157 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
FRG1-207ENST00000533157 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
FRG1-207ENST00000533157 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
FRG1-207ENST00000533157 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
FRG1-207ENST00000533157 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
FRG1-207ENST00000533157 NUP160Q12769 1436 aa15.7■□□□□ 0.1
FRG1-207ENST00000533157 ADAMTS12P58397 1594 aa15.69■□□□□ 0.1
FRG1-207ENST00000533157 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
FRG1-207ENST00000533157 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
FRG1-207ENST00000533157 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
FRG1-207ENST00000533157 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
FRG1-207ENST00000533157 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
FRG1-207ENST00000533157 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
FRG1-207ENST00000533157 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
FRG1-207ENST00000533157 IGF1RP08069 1367 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms