RNA–Protein interactions for RNA: ENST00000532879.5

RELA-219, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-219ENST00000532879 NISCHQ9Y2I1 1504 aa25.2■■□□□ 1.62
RELA-219ENST00000532879 ABCC9O60706 1549 aa23.67■■□□□ 1.38
RELA-219ENST00000532879 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
RELA-219ENST00000532879 CCDC180Q9P1Z9 1646 aa22.78■■□□□ 1.24
RELA-219ENST00000532879 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
RELA-219ENST00000532879 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
RELA-219ENST00000532879 NACADO15069 1562 aa21.78■■□□□ 1.08
RELA-219ENST00000532879 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
RELA-219ENST00000532879 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
RELA-219ENST00000532879 DNAJC5Q9H3Z4 198 aa21.54■■□□□ 1.04
RELA-219ENST00000532879 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.03
RELA-219ENST00000532879 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
RELA-219ENST00000532879 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
RELA-219ENST00000532879 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
RELA-219ENST00000532879 SHROOM4Q9ULL8 1493 aa21.1■□□□□ 0.97
RELA-219ENST00000532879 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
RELA-219ENST00000532879 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
RELA-219ENST00000532879 ZCCHC6Q5VYS8 1495 aaKnown RBP20.72■□□□□ 0.91
RELA-219ENST00000532879 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
RELA-219ENST00000532879 CUX2O14529 1486 aa20.62■□□□□ 0.89
RELA-219ENST00000532879 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
RELA-219ENST00000532879 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
RELA-219ENST00000532879 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
RELA-219ENST00000532879 NESP48681 1621 aa20.13■□□□□ 0.81
RELA-219ENST00000532879 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
RELA-219ENST00000532879 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
RELA-219ENST00000532879 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
RELA-219ENST00000532879 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
RELA-219ENST00000532879 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
RELA-219ENST00000532879 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
RELA-219ENST00000532879 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
RELA-219ENST00000532879 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
RELA-219ENST00000532879 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
RELA-219ENST00000532879 OSCARQ8IYS5 282 aa19.65■□□□□ 0.74
RELA-219ENST00000532879 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
RELA-219ENST00000532879 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
RELA-219ENST00000532879 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
RELA-219ENST00000532879 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
RELA-219ENST00000532879 WDR62O43379 1518 aa19.56■□□□□ 0.72
RELA-219ENST00000532879 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
RELA-219ENST00000532879 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
RELA-219ENST00000532879 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
RELA-219ENST00000532879 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
RELA-219ENST00000532879 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
RELA-219ENST00000532879 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
RELA-219ENST00000532879 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
RELA-219ENST00000532879 CYB5RLQ6IPT4 315 aa19.28■□□□□ 0.68
RELA-219ENST00000532879 ARHGEF11O15085 1522 aa19.27■□□□□ 0.68
RELA-219ENST00000532879 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
RELA-219ENST00000532879 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
RELA-219ENST00000532879 CFTRP13569 1480 aa19.17■□□□□ 0.66
RELA-219ENST00000532879 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
RELA-219ENST00000532879 WIZO95785 1651 aa19.11■□□□□ 0.65
RELA-219ENST00000532879 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
RELA-219ENST00000532879 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
RELA-219ENST00000532879 FBLN2P98095 1184 aa18.92■□□□□ 0.62
RELA-219ENST00000532879 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
RELA-219ENST00000532879 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.611e-9■■■■■ 31.1
RELA-219ENST00000532879 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
RELA-219ENST00000532879 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
RELA-219ENST00000532879 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
RELA-219ENST00000532879 CHD1O14646 1710 aa18.82■□□□□ 0.6
RELA-219ENST00000532879 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
RELA-219ENST00000532879 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
RELA-219ENST00000532879 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
RELA-219ENST00000532879 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
RELA-219ENST00000532879 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
RELA-219ENST00000532879 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
RELA-219ENST00000532879 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
RELA-219ENST00000532879 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
RELA-219ENST00000532879 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
RELA-219ENST00000532879 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
RELA-219ENST00000532879 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
RELA-219ENST00000532879 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
RELA-219ENST00000532879 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
RELA-219ENST00000532879 SOGA1O94964 1423 aa18.57■□□□□ 0.56
RELA-219ENST00000532879 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
RELA-219ENST00000532879 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
RELA-219ENST00000532879 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
RELA-219ENST00000532879 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
RELA-219ENST00000532879 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
RELA-219ENST00000532879 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
RELA-219ENST00000532879 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
RELA-219ENST00000532879 WDR97A6NE52 1622 aa18.39■□□□□ 0.53
RELA-219ENST00000532879 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
RELA-219ENST00000532879 KDM4FA0A1W2PPD8 638 aa18.36■□□□□ 0.53
RELA-219ENST00000532879 CUX1P39880 1505 aa18.28■□□□□ 0.52
RELA-219ENST00000532879 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
RELA-219ENST00000532879 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
RELA-219ENST00000532879 KIF13AQ9H1H9 1805 aa18.23■□□□□ 0.51
RELA-219ENST00000532879 GRIN2AQ12879 1464 aa18.21■□□□□ 0.51
RELA-219ENST00000532879 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
RELA-219ENST00000532879 NUP160Q12769 1436 aa18.2■□□□□ 0.5
RELA-219ENST00000532879 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
RELA-219ENST00000532879 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
RELA-219ENST00000532879 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
RELA-219ENST00000532879 SHROOM2Q13796 1616 aa18.11■□□□□ 0.49
RELA-219ENST00000532879 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
RELA-219ENST00000532879 NPM1P06748 294 aaKnown RBP eCLIP18.09■□□□□ 0.49
RELA-219ENST00000532879 JPH4Q96JJ6 628 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms