RNA–Protein interactions for RNA: ENST00000532718.5

SLC39A4-209, Transcript of solute carrier family 39 member 4, humanhuman

TSL 1 (best)

Gene SLC39A4, Length 668 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-209ENST00000532718 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
SLC39A4-209ENST00000532718 ABCC9O60706 1549 aa33.99■■■■□ 3.03
SLC39A4-209ENST00000532718 CCDC180Q9P1Z9 1646 aa33.98■■■■□ 3.03
SLC39A4-209ENST00000532718 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
SLC39A4-209ENST00000532718 NACADO15069 1562 aa32.15■■■□□ 2.74
SLC39A4-209ENST00000532718 DCAF8L2P0C7V8 631 aa32.14■■■□□ 2.74
SLC39A4-209ENST00000532718 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
SLC39A4-209ENST00000532718 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
SLC39A4-209ENST00000532718 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
SLC39A4-209ENST00000532718 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
SLC39A4-209ENST00000532718 ZCCHC6Q5VYS8 1495 aaKnown RBP31.37■■■□□ 2.61
SLC39A4-209ENST00000532718 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
SLC39A4-209ENST00000532718 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
SLC39A4-209ENST00000532718 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SLC39A4-209ENST00000532718 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
SLC39A4-209ENST00000532718 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
SLC39A4-209ENST00000532718 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
SLC39A4-209ENST00000532718 EIF4G1Q04637 1599 aaKnown RBP30.62■■■□□ 2.49
SLC39A4-209ENST00000532718 NCAPD3P42695 1498 aa29.66■■■□□ 2.34
SLC39A4-209ENST00000532718 ATAD2BQ9ULI0 1458 aa29.56■■■□□ 2.32
SLC39A4-209ENST00000532718 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
SLC39A4-209ENST00000532718 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
SLC39A4-209ENST00000532718 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
SLC39A4-209ENST00000532718 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
SLC39A4-209ENST00000532718 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
SLC39A4-209ENST00000532718 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
SLC39A4-209ENST00000532718 CUX2O14529 1486 aa29.29■■■□□ 2.28
SLC39A4-209ENST00000532718 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
SLC39A4-209ENST00000532718 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
SLC39A4-209ENST00000532718 NESP48681 1621 aa29.17■■■□□ 2.26
SLC39A4-209ENST00000532718 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
SLC39A4-209ENST00000532718 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
SLC39A4-209ENST00000532718 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
SLC39A4-209ENST00000532718 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
SLC39A4-209ENST00000532718 WIZO95785 1651 aa28.83■■■□□ 2.21
SLC39A4-209ENST00000532718 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
SLC39A4-209ENST00000532718 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
SLC39A4-209ENST00000532718 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
SLC39A4-209ENST00000532718 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
SLC39A4-209ENST00000532718 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
SLC39A4-209ENST00000532718 WDR62O43379 1518 aa28.48■■■□□ 2.15
SLC39A4-209ENST00000532718 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SLC39A4-209ENST00000532718 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
SLC39A4-209ENST00000532718 CFTRP13569 1480 aa28.43■■■□□ 2.14
SLC39A4-209ENST00000532718 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
SLC39A4-209ENST00000532718 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
SLC39A4-209ENST00000532718 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
SLC39A4-209ENST00000532718 TRIM41Q8WV44 630 aa28.07■■■□□ 2.08
SLC39A4-209ENST00000532718 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
SLC39A4-209ENST00000532718 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
SLC39A4-209ENST00000532718 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
SLC39A4-209ENST00000532718 TOPBP1Q92547 1522 aa27.9■■■□□ 2.06
SLC39A4-209ENST00000532718 ZNF608Q9ULD9 1512 aaPredicted RBP27.83■■■□□ 2.05
SLC39A4-209ENST00000532718 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
SLC39A4-209ENST00000532718 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
SLC39A4-209ENST00000532718 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.012e-8■■■■■ 28.7
SLC39A4-209ENST00000532718 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
SLC39A4-209ENST00000532718 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
SLC39A4-209ENST00000532718 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
SLC39A4-209ENST00000532718 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
SLC39A4-209ENST00000532718 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
SLC39A4-209ENST00000532718 FBLN2P98095 1184 aa27.55■■■□□ 2
SLC39A4-209ENST00000532718 SOGA1O94964 1423 aa27.55■■■□□ 2
SLC39A4-209ENST00000532718 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
SLC39A4-209ENST00000532718 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
SLC39A4-209ENST00000532718 CHD1O14646 1710 aa27.49■■□□□ 1.99
SLC39A4-209ENST00000532718 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
SLC39A4-209ENST00000532718 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
SLC39A4-209ENST00000532718 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
SLC39A4-209ENST00000532718 CUX1P39880 1505 aa27.41■■□□□ 1.98
SLC39A4-209ENST00000532718 WDR97A6NE52 1622 aa27.38■■□□□ 1.97
SLC39A4-209ENST00000532718 CYB5RLQ6IPT4 315 aa27.38■■□□□ 1.97
SLC39A4-209ENST00000532718 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
SLC39A4-209ENST00000532718 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
SLC39A4-209ENST00000532718 GRIN2BQ13224 1484 aa27.29■■□□□ 1.96
SLC39A4-209ENST00000532718 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
SLC39A4-209ENST00000532718 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
SLC39A4-209ENST00000532718 ARAP1Q96P48 1450 aa27.2■■□□□ 1.95
SLC39A4-209ENST00000532718 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
SLC39A4-209ENST00000532718 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
SLC39A4-209ENST00000532718 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
SLC39A4-209ENST00000532718 CLASP1Q7Z460 1538 aa27.14■■□□□ 1.94
SLC39A4-209ENST00000532718 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
SLC39A4-209ENST00000532718 TRHP20396 242 aaPredicted RBP27.13■■□□□ 1.93
SLC39A4-209ENST00000532718 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
SLC39A4-209ENST00000532718 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
SLC39A4-209ENST00000532718 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
SLC39A4-209ENST00000532718 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
SLC39A4-209ENST00000532718 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
SLC39A4-209ENST00000532718 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
SLC39A4-209ENST00000532718 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
SLC39A4-209ENST00000532718 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
SLC39A4-209ENST00000532718 NUP160Q12769 1436 aa26.8■■□□□ 1.88
SLC39A4-209ENST00000532718 CEP170Q5SW79 1584 aa26.79■■□□□ 1.88
SLC39A4-209ENST00000532718 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
SLC39A4-209ENST00000532718 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
SLC39A4-209ENST00000532718 JPH4Q96JJ6 628 aa26.62■■□□□ 1.85
SLC39A4-209ENST00000532718 PRG4Q92954 1404 aaPredicted RBP26.6■■□□□ 1.85
SLC39A4-209ENST00000532718 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
SLC39A4-209ENST00000532718 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms