RNA–Protein interactions for RNA: ENST00000532669.5

CHEK1-214, Transcript of checkpoint kinase 1, humanhuman

TSL 5

Gene CHEK1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-214ENST00000532669 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
CHEK1-214ENST00000532669 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
CHEK1-214ENST00000532669 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
CHEK1-214ENST00000532669 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
CHEK1-214ENST00000532669 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
CHEK1-214ENST00000532669 FOXD1Q16676 465 aa24.55■■□□□ 1.52
CHEK1-214ENST00000532669 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
CHEK1-214ENST00000532669 ABCC9O60706 1549 aa24.26■■□□□ 1.47
CHEK1-214ENST00000532669 PLPPR3Q6T4P5 718 aa23.71■■□□□ 1.39
CHEK1-214ENST00000532669 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
CHEK1-214ENST00000532669 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
CHEK1-214ENST00000532669 ADRA2BP18089 450 aa23.05■■□□□ 1.28
CHEK1-214ENST00000532669 NACADO15069 1562 aa23.01■■□□□ 1.27
CHEK1-214ENST00000532669 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
CHEK1-214ENST00000532669 MSH5O43196 834 aa22.85■■□□□ 1.25
CHEK1-214ENST00000532669 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
CHEK1-214ENST00000532669 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
CHEK1-214ENST00000532669 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
CHEK1-214ENST00000532669 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
CHEK1-214ENST00000532669 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
CHEK1-214ENST00000532669 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
CHEK1-214ENST00000532669 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
CHEK1-214ENST00000532669 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
CHEK1-214ENST00000532669 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
CHEK1-214ENST00000532669 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
CHEK1-214ENST00000532669 POTEDQ86YR6 584 aa21.99■■□□□ 1.11
CHEK1-214ENST00000532669 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
CHEK1-214ENST00000532669 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
CHEK1-214ENST00000532669 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
CHEK1-214ENST00000532669 NCAPD3P42695 1498 aa21.27■■□□□ 1
CHEK1-214ENST00000532669 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
CHEK1-214ENST00000532669 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
CHEK1-214ENST00000532669 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
CHEK1-214ENST00000532669 MAPK8IP2Q13387 824 aaPredicted RBP21.12■□□□□ 0.97
CHEK1-214ENST00000532669 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
CHEK1-214ENST00000532669 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
CHEK1-214ENST00000532669 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
CHEK1-214ENST00000532669 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
CHEK1-214ENST00000532669 BAZ1BQ9UIG0 1483 aaKnown RBP20.98■□□□□ 0.95
CHEK1-214ENST00000532669 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
CHEK1-214ENST00000532669 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
CHEK1-214ENST00000532669 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
CHEK1-214ENST00000532669 CUX2O14529 1486 aa20.91■□□□□ 0.94
CHEK1-214ENST00000532669 NESP48681 1621 aa20.87■□□□□ 0.93
CHEK1-214ENST00000532669 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
CHEK1-214ENST00000532669 PPP4R3CPQ6ZMV5 832 aa20.82■□□□□ 0.92
CHEK1-214ENST00000532669 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
CHEK1-214ENST00000532669 WIZO95785 1651 aa20.67■□□□□ 0.9
CHEK1-214ENST00000532669 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
CHEK1-214ENST00000532669 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
CHEK1-214ENST00000532669 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
CHEK1-214ENST00000532669 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
CHEK1-214ENST00000532669 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
CHEK1-214ENST00000532669 MRC2Q9UBG0 1479 aa20.45■□□□□ 0.86
CHEK1-214ENST00000532669 TOP2AP11388 1531 aaKnown RBP20.44■□□□□ 0.86
CHEK1-214ENST00000532669 CFTRP13569 1480 aa20.41■□□□□ 0.86
CHEK1-214ENST00000532669 WDR62O43379 1518 aa20.41■□□□□ 0.86
CHEK1-214ENST00000532669 CNKSR2Q8WXI2 1034 aa20.38■□□□□ 0.85
CHEK1-214ENST00000532669 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
CHEK1-214ENST00000532669 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
CHEK1-214ENST00000532669 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
CHEK1-214ENST00000532669 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
CHEK1-214ENST00000532669 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
CHEK1-214ENST00000532669 RNF216Q9NWF9 866 aaPredicted RBP20.15■□□□□ 0.82
CHEK1-214ENST00000532669 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
CHEK1-214ENST00000532669 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
CHEK1-214ENST00000532669 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
CHEK1-214ENST00000532669 IFT140Q96RY7 1462 aa19.98■□□□□ 0.79
CHEK1-214ENST00000532669 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
CHEK1-214ENST00000532669 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
CHEK1-214ENST00000532669 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
CHEK1-214ENST00000532669 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
CHEK1-214ENST00000532669 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
CHEK1-214ENST00000532669 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
CHEK1-214ENST00000532669 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
CHEK1-214ENST00000532669 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
CHEK1-214ENST00000532669 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
CHEK1-214ENST00000532669 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
CHEK1-214ENST00000532669 AQRO60306 1485 aaKnown RBP eCLIP19.75■□□□□ 0.755e-8■■■■■ 34.4
CHEK1-214ENST00000532669 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
CHEK1-214ENST00000532669 SOGA1O94964 1423 aa19.69■□□□□ 0.74
CHEK1-214ENST00000532669 CUX1P39880 1505 aa19.67■□□□□ 0.74
CHEK1-214ENST00000532669 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
CHEK1-214ENST00000532669 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
CHEK1-214ENST00000532669 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
CHEK1-214ENST00000532669 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
CHEK1-214ENST00000532669 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
CHEK1-214ENST00000532669 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
CHEK1-214ENST00000532669 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
CHEK1-214ENST00000532669 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
CHEK1-214ENST00000532669 CHD1O14646 1710 aa19.62■□□□□ 0.73
CHEK1-214ENST00000532669 KCNA4P22459 653 aa19.6■□□□□ 0.73
CHEK1-214ENST00000532669 FBLN2P98095 1184 aa19.56■□□□□ 0.72
CHEK1-214ENST00000532669 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
CHEK1-214ENST00000532669 RNF39Q9H2S5 420 aa19.55■□□□□ 0.72
CHEK1-214ENST00000532669 GRIN2BQ13224 1484 aa19.52■□□□□ 0.72
CHEK1-214ENST00000532669 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
CHEK1-214ENST00000532669 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
CHEK1-214ENST00000532669 CACNB1Q02641 598 aaPredicted RBP19.47■□□□□ 0.71
CHEK1-214ENST00000532669 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms