RNA–Protein interactions for RNA: ENST00000532389.5

SERGEF-220, Transcript of secretion regulating guanine nucleotide exchange factor, humanhuman

TSL 5

Gene SERGEF, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERGEF-220ENST00000532389 QKIQ96PU8 341 aaKnown RBP eCLIP20.73■□□□□ 0.913e-23■■■■■ 130.9
SERGEF-220ENST00000532389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.24■■□□□ 1.154e-6■■■■■ 111.8
SERGEF-220ENST00000532389 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.48■□□□□ 0.872e-11■■■■■ 71.9
SERGEF-220ENST00000532389 SF3B1O75533 1304 aaKnown RBP eCLIP23.13■■□□□ 1.294e-8■■■■■ 68.9
SERGEF-220ENST00000532389 DKC1O60832 514 aaKnown RBP eCLIP23.63■■□□□ 1.373e-15■■■■■ 68.7
SERGEF-220ENST00000532389 PCBP2Q15366 365 aaKnown RBP eCLIP19.52■□□□□ 0.723e-13■■■■■ 54.8
SERGEF-220ENST00000532389 GTF2F1P35269 517 aaKnown RBP eCLIP23.47■■□□□ 1.354e-7■■■■■ 39.6
SERGEF-220ENST00000532389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.41■■■□□ 2.782e-9■■■■■ 39.6
SERGEF-220ENST00000532389 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.87■□□□□ 0.774e-11■■■■■ 30.9
SERGEF-220ENST00000532389 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.44■■□□□ 1.665e-7■■■■■ 29.1
SERGEF-220ENST00000532389 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.23■□□□□ 0.991e-7■■■■■ 28.7
SERGEF-220ENST00000532389 PRPF4O43172 522 aaKnown RBP eCLIP20.08■□□□□ 0.811e-8■■■■□ 24.8
SERGEF-220ENST00000532389 RBFOX2O43251 390 aaKnown RBP eCLIP16■□□□□ 0.157e-7■■■■□ 22.6
SERGEF-220ENST00000532389 TARDBPQ13148 414 aaKnown RBP eCLIP21.25■□□□□ 0.993e-6■■■■□ 20.8
SERGEF-220ENST00000532389 KHSRPQ92945 711 aaKnown RBP eCLIP23.39■■□□□ 1.332e-6■■■■□ 20.6
SERGEF-220ENST00000532389 FUSP35637 526 aaKnown RBP eCLIP14.14□□□□□ -0.154e-8■■■■□ 20.5
SERGEF-220ENST00000532389 PTBP1P26599 531 aaKnown RBP eCLIP15.86■□□□□ 0.133e-8■■■□□ 18.7
SERGEF-220ENST00000532389 TAF15Q92804 592 aaKnown RBP eCLIP17.29■□□□□ 0.366e-7■■■□□ 17.2
SERGEF-220ENST00000532389 SF3A3Q12874 501 aaKnown RBP eCLIP18.13■□□□□ 0.493e-7■■■□□ 17.2
SERGEF-220ENST00000532389 HNRNPMP52272 730 aaKnown RBP eCLIP33.43■■■□□ 2.947e-7■■■□□ 17
SERGEF-220ENST00000532389 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.05■□□□□ 0.484e-7■■■□□ 16.8
SERGEF-220ENST00000532389 CDC40O60508 579 aaKnown RBP eCLIP19.51■□□□□ 0.715e-7■■■□□ 15.4
SERGEF-220ENST00000532389 HNRNPLP14866 589 aaKnown RBP eCLIP22.01■■□□□ 1.111e-6■■□□□ 12.8
SERGEF-220ENST00000532389 EFTUD2Q15029 972 aaKnown RBP eCLIP19.64■□□□□ 0.731e-16■■□□□ 12.4
SERGEF-220ENST00000532389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.74■■■□□ 2.191e-6■■□□□ 12.3
SERGEF-220ENST00000532389 SRSF1Q07955 248 aaKnown RBP eCLIP20.01■□□□□ 0.794e-6■■□□□ 12
SERGEF-220ENST00000532389 PPIGQ13427 754 aaKnown RBP eCLIP24.48■■□□□ 1.512e-7■■□□□ 11.5
SERGEF-220ENST00000532389 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.39■■□□□ 1.495e-9■■□□□ 11.4
SERGEF-220ENST00000532389 NCBP2P52298 156 aaKnown RBP eCLIP19.15■□□□□ 0.663e-7■□□□□ 11
SERGEF-220ENST00000532389 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.16■□□□□ 0.667e-7■□□□□ 11
SERGEF-220ENST00000532389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.98■■□□□ 1.272e-20■□□□□ 10.3
SERGEF-220ENST00000532389 U2AF2P26368 475 aaKnown RBP eCLIP23.26■■□□□ 1.312e-6■□□□□ 9.6
SERGEF-220ENST00000532389 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■□□□□ 9.6
SERGEF-220ENST00000532389 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.75■□□□□ 0.913e-6■□□□□ 9
Retrieved 34 of 34 RNA–protein pairs in 16.5 ms