RNA–Protein interactions for RNA: ENST00000531865.5

SLC39A13-211, Transcript of solute carrier family 39 member 13, human

TSL 5

Gene SLC39A13, Length 846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC39A13-211	ENST00000531865	NISCH	Q9Y2I1	1504 aa		44.34	■■■■■ 4.69
SLC39A13-211	ENST00000531865	CCDC180	Q9P1Z9	1646 aa		39.44	■■■■□ 3.9
SLC39A13-211	ENST00000531865	ABCC9	O60706	1549 aa		39.06	■■■■□ 3.84
SLC39A13-211	ENST00000531865	RB1CC1	Q8TDY2	1594 aa		37.1	■■■■□ 3.53
SLC39A13-211	ENST00000531865	NACAD	O15069	1562 aa		37.07	■■■■□ 3.52
SLC39A13-211	ENST00000531865	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.95	■■■■□ 3.51
SLC39A13-211	ENST00000531865	DCAF8L2	P0C7V8	631 aa		36.94	■■■■□ 3.5
SLC39A13-211	ENST00000531865	DNAJC5B	Q9UF47	199 aa		36.9	■■■■□ 3.5
SLC39A13-211	ENST00000531865	MYO15B	Q96JP2	1530 aa		36.88	■■■■□ 3.49
SLC39A13-211	ENST00000531865	DCAF1	Q9Y4B6	1507 aa		36.73	■■■■□ 3.47
SLC39A13-211	ENST00000531865	UNC13A	Q9UPW8	1703 aa		36.34	■■■■□ 3.41
SLC39A13-211	ENST00000531865	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.27	■■■■□ 3.4
SLC39A13-211	ENST00000531865	BICRA	Q9NZM4	1560 aa		36.07	■■■■□ 3.37
SLC39A13-211	ENST00000531865	SCRIB	Q14160	1630 aa		35.94	■■■■□ 3.34
SLC39A13-211	ENST00000531865	SHROOM4	Q9ULL8	1493 aa		35.65	■■■■□ 3.3
SLC39A13-211	ENST00000531865	CC2D2A	Q9P2K1	1620 aa		35.31	■■■■□ 3.24
SLC39A13-211	ENST00000531865	CECR2	Q9BXF3	1484 aa		35.21	■■■■□ 3.23
SLC39A13-211	ENST00000531865	EIF4G1	Q04637	1599 aa	Known RBP	35.17	■■■■□ 3.22
SLC39A13-211	ENST00000531865	SMARCA4	P51532	1647 aa		34.41	■■■■□ 3.1
SLC39A13-211	ENST00000531865	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.38	■■■■□ 3.09
SLC39A13-211	ENST00000531865	ATAD2B	Q9ULI0	1458 aa		34.2	■■■■□ 3.07
SLC39A13-211	ENST00000531865	NCAPD3	P42695	1498 aa		34.19	■■■■□ 3.06
SLC39A13-211	ENST00000531865	SMARCA2	P51531	1590 aa		34.18	■■■■□ 3.06
SLC39A13-211	ENST00000531865	MROH2B	Q7Z745	1585 aa		34.15	■■■■□ 3.06
SLC39A13-211	ENST00000531865	PEG3	Q9GZU2	1588 aa		34.1	■■■■□ 3.05
SLC39A13-211	ENST00000531865	DNAJC5	Q9H3Z4	198 aa		34.05	■■■■□ 3.04
SLC39A13-211	ENST00000531865	HMGXB3	Q12766	1538 aa		34.04	■■■■□ 3.04
SLC39A13-211	ENST00000531865	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.92	■■■■□ 3.02
SLC39A13-211	ENST00000531865	CUX2	O14529	1486 aa		33.79	■■■■□ 3
SLC39A13-211	ENST00000531865	WIZ	O95785	1651 aa		33.78	■■■■□ 3
SLC39A13-211	ENST00000531865	RSF1	Q96T23	1441 aa	Predicted RBP	33.77	■■■■□ 3
SLC39A13-211	ENST00000531865	ERCC6	Q03468	1493 aa		33.7	■■■□□ 2.99
SLC39A13-211	ENST00000531865	NES	P48681	1621 aa		33.51	■■■□□ 2.96
SLC39A13-211	ENST00000531865	TOP2A	P11388	1531 aa	Known RBP	33.46	■■■□□ 2.95
SLC39A13-211	ENST00000531865	LAMC3	Q9Y6N6	1575 aa		33.3	■■■□□ 2.92
SLC39A13-211	ENST00000531865	THOC2	Q8NI27	1593 aa	Known RBP	33.27	■■■□□ 2.92
SLC39A13-211	ENST00000531865	CADPS	Q9ULU8	1353 aa		33.18	■■■□□ 2.9
SLC39A13-211	ENST00000531865	KIF21A	Q7Z4S6	1674 aa		33.1	■■■□□ 2.89
SLC39A13-211	ENST00000531865	PDS5B	Q9NTI5	1447 aa		33.06	■■■□□ 2.88
SLC39A13-211	ENST00000531865	CCDC88B	A6NC98	1476 aa		33.04	■■■□□ 2.88
SLC39A13-211	ENST00000531865	CFTR	P13569	1480 aa		33	■■■□□ 2.87
SLC39A13-211	ENST00000531865	SUPT5H	O00267	1087 aa	Known RBP	32.87	■■■□□ 2.85
SLC39A13-211	ENST00000531865	FANCD2	Q9BXW9	1451 aa		32.8	■■■□□ 2.84
SLC39A13-211	ENST00000531865	PRDM2	Q13029	1718 aa		32.78	■■■□□ 2.84
SLC39A13-211	ENST00000531865	CEP164	Q9UPV0	1460 aa		32.77	■■■□□ 2.84
SLC39A13-211	ENST00000531865	MRC2	Q9UBG0	1479 aa		32.75	■■■□□ 2.83
SLC39A13-211	ENST00000531865	WDR62	O43379	1518 aa		32.72	■■■□□ 2.83
SLC39A13-211	ENST00000531865	URB2	Q14146	1524 aa	Known RBP	32.46	■■■□□ 2.79
SLC39A13-211	ENST00000531865	TRIM41	Q8WV44	630 aa		32.39	■■■□□ 2.78
SLC39A13-211	ENST00000531865	ABCC8	Q09428	1581 aa		32.31	■■■□□ 2.76
SLC39A13-211	ENST00000531865	TOPBP1	Q92547	1522 aa		32.28	■■■□□ 2.76
SLC39A13-211	ENST00000531865	DNMBP	Q6XZF7	1577 aa		32.26	■■■□□ 2.75
SLC39A13-211	ENST00000531865	OSCAR	Q8IYS5	282 aa		32.1	■■■□□ 2.73
SLC39A13-211	ENST00000531865	IFT140	Q96RY7	1462 aa		32.09	■■■□□ 2.73
SLC39A13-211	ENST00000531865	CUX1	P39880	1505 aa		32.04	■■■□□ 2.72
SLC39A13-211	ENST00000531865	POLA1	P09884	1462 aa	Predicted RBP	32.01	■■■□□ 2.71
SLC39A13-211	ENST00000531865	TARBP1	Q13395	1621 aa	Known RBP	31.93	■■■□□ 2.7
SLC39A13-211	ENST00000531865	FGD5	Q6ZNL6	1462 aa		31.93	■■■□□ 2.7
SLC39A13-211	ENST00000531865	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.92	■■■□□ 2.7
SLC39A13-211	ENST00000531865	SOGA1	O94964	1423 aa		31.87	■■■□□ 2.69
SLC39A13-211	ENST00000531865	RIMBP3C	A6NJZ7	1639 aa		31.86	■■■□□ 2.69
SLC39A13-211	ENST00000531865	RIMBP3B	A6NNM3	1639 aa		31.86	■■■□□ 2.69
SLC39A13-211	ENST00000531865	RIMBP3	Q9UFD9	1639 aa		31.86	■■■□□ 2.69
SLC39A13-211	ENST00000531865	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.85	■■■□□ 2.69
SLC39A13-211	ENST00000531865	RAD54L2	Q9Y4B4	1467 aa		31.84	■■■□□ 2.69
SLC39A13-211	ENST00000531865	EIF4G3	O43432	1585 aa	Known RBP	31.81	■■■□□ 2.68
SLC39A13-211	ENST00000531865	TOP2B	Q02880	1626 aa		31.8	■■■□□ 2.68
SLC39A13-211	ENST00000531865	BIVM-ERCC5	R4GMW8	1640 aa		31.8	■■■□□ 2.68
SLC39A13-211	ENST00000531865	SYNJ1	O43426	1573 aa		31.77	■■■□□ 2.68
SLC39A13-211	ENST00000531865	WDR97	A6NE52	1622 aa		31.74	■■■□□ 2.67
SLC39A13-211	ENST00000531865	AQR	O60306	1485 aa	Known RBP eCLIP	31.72	■■■□□ 2.67	2e-8	■■■■■ 42.3
SLC39A13-211	ENST00000531865	ARHGEF11	O15085	1522 aa		31.7	■■■□□ 2.67
SLC39A13-211	ENST00000531865	TDRD9	Q8NDG6	1382 aa	Known RBP	31.66	■■■□□ 2.66
SLC39A13-211	ENST00000531865	ABCA10	Q8WWZ4	1543 aa		31.65	■■■□□ 2.66
SLC39A13-211	ENST00000531865	CHD1	O14646	1710 aa		31.6	■■■□□ 2.65
SLC39A13-211	ENST00000531865	ABCA5	Q8WWZ7	1642 aa		31.53	■■■□□ 2.64
SLC39A13-211	ENST00000531865	GRIN2B	Q13224	1484 aa		31.51	■■■□□ 2.63
SLC39A13-211	ENST00000531865	GAPVD1	Q14C86	1478 aa		31.51	■■■□□ 2.63
SLC39A13-211	ENST00000531865	PBRM1	Q86U86	1689 aa		31.46	■■■□□ 2.63
SLC39A13-211	ENST00000531865	SNAPC4	Q5SXM2	1469 aa		31.46	■■■□□ 2.63
SLC39A13-211	ENST00000531865	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.44	■■■□□ 2.62
SLC39A13-211	ENST00000531865	ARAP1	Q96P48	1450 aa		31.39	■■■□□ 2.62
SLC39A13-211	ENST00000531865	CYB5RL	Q6IPT4	315 aa		31.38	■■■□□ 2.61
SLC39A13-211	ENST00000531865	FBLN2	P98095	1184 aa		31.32	■■■□□ 2.6
SLC39A13-211	ENST00000531865	SYNJ2	O15056	1496 aa		31.31	■■■□□ 2.6
SLC39A13-211	ENST00000531865	ERICH3	Q5RHP9	1530 aa		31.27	■■■□□ 2.6
SLC39A13-211	ENST00000531865	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.25	■■■□□ 2.59
SLC39A13-211	ENST00000531865	ADAMTS12	P58397	1594 aa		31.22	■■■□□ 2.59
SLC39A13-211	ENST00000531865	CLASP1	Q7Z460	1538 aa		31.22	■■■□□ 2.59
SLC39A13-211	ENST00000531865	KIF27	Q86VH2	1401 aa		31.19	■■■□□ 2.58
SLC39A13-211	ENST00000531865	FHAD1	B1AJZ9	1412 aa		31.15	■■■□□ 2.58
SLC39A13-211	ENST00000531865	GRIN2A	Q12879	1464 aa		31.1	■■■□□ 2.57
SLC39A13-211	ENST00000531865	TRH	P20396	242 aa	Predicted RBP	31.09	■■■□□ 2.57
SLC39A13-211	ENST00000531865	IGF1R	P08069	1367 aa		31.04	■■■□□ 2.56
SLC39A13-211	ENST00000531865	CUL7	Q14999	1698 aa		31	■■■□□ 2.55
SLC39A13-211	ENST00000531865	NUP160	Q12769	1436 aa		30.98	■■■□□ 2.55
SLC39A13-211	ENST00000531865	CEP170	Q5SW79	1584 aa		30.95	■■■□□ 2.54
SLC39A13-211	ENST00000531865	RUSC2	Q8N2Y8	1516 aa		30.87	■■■□□ 2.53
SLC39A13-211	ENST00000531865	CARMIL1	Q5VZK9	1371 aa		30.86	■■■□□ 2.53
SLC39A13-211	ENST00000531865	SHROOM2	Q13796	1616 aa		30.75	■■■□□ 2.51

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms