RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 NISCHQ9Y2I1 1504 aa22.66■■□□□ 1.22
RELA-217ENST00000531484 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
RELA-217ENST00000531484 ABCC9O60706 1549 aa19.24■□□□□ 0.67
RELA-217ENST00000531484 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
RELA-217ENST00000531484 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
RELA-217ENST00000531484 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
RELA-217ENST00000531484 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
RELA-217ENST00000531484 NACADO15069 1562 aa18.5■□□□□ 0.55
RELA-217ENST00000531484 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
RELA-217ENST00000531484 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
RELA-217ENST00000531484 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
RELA-217ENST00000531484 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.54e-10■□□□□ 10.7
RELA-217ENST00000531484 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
RELA-217ENST00000531484 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
RELA-217ENST00000531484 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
RELA-217ENST00000531484 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
RELA-217ENST00000531484 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
RELA-217ENST00000531484 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
RELA-217ENST00000531484 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
RELA-217ENST00000531484 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
RELA-217ENST00000531484 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
RELA-217ENST00000531484 WIZO95785 1651 aa17.44■□□□□ 0.38
RELA-217ENST00000531484 DNAJC5BQ9UF47 199 aa17.39■□□□□ 0.37
RELA-217ENST00000531484 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
RELA-217ENST00000531484 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
RELA-217ENST00000531484 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
RELA-217ENST00000531484 HRCP23327 699 aa17.22■□□□□ 0.35
RELA-217ENST00000531484 PEG3Q9GZU2 1588 aa17.19■□□□□ 0.34
RELA-217ENST00000531484 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
RELA-217ENST00000531484 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
RELA-217ENST00000531484 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
RELA-217ENST00000531484 TOP2AP11388 1531 aaKnown RBP17.12■□□□□ 0.33
RELA-217ENST00000531484 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
RELA-217ENST00000531484 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
RELA-217ENST00000531484 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
RELA-217ENST00000531484 NESP48681 1621 aa16.83■□□□□ 0.29
RELA-217ENST00000531484 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
RELA-217ENST00000531484 TRIM41Q8WV44 630 aa16.77■□□□□ 0.27
RELA-217ENST00000531484 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
RELA-217ENST00000531484 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
RELA-217ENST00000531484 CFTRP13569 1480 aa16.7■□□□□ 0.26
RELA-217ENST00000531484 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
RELA-217ENST00000531484 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
RELA-217ENST00000531484 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
RELA-217ENST00000531484 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
RELA-217ENST00000531484 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
RELA-217ENST00000531484 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
RELA-217ENST00000531484 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
RELA-217ENST00000531484 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
RELA-217ENST00000531484 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
RELA-217ENST00000531484 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
RELA-217ENST00000531484 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
RELA-217ENST00000531484 CUX1P39880 1505 aa16.44■□□□□ 0.22
RELA-217ENST00000531484 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
RELA-217ENST00000531484 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
RELA-217ENST00000531484 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
RELA-217ENST00000531484 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
RELA-217ENST00000531484 TOPBP1Q92547 1522 aa16.34■□□□□ 0.21
RELA-217ENST00000531484 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
RELA-217ENST00000531484 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
RELA-217ENST00000531484 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
RELA-217ENST00000531484 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
RELA-217ENST00000531484 SOGA1O94964 1423 aa16.29■□□□□ 0.2
RELA-217ENST00000531484 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
RELA-217ENST00000531484 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
RELA-217ENST00000531484 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
RELA-217ENST00000531484 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
RELA-217ENST00000531484 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
RELA-217ENST00000531484 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
RELA-217ENST00000531484 EEA1Q15075 1411 aa16.22■□□□□ 0.19
RELA-217ENST00000531484 WDR62O43379 1518 aa16.22■□□□□ 0.19
RELA-217ENST00000531484 CUX2O14529 1486 aa16.2■□□□□ 0.18
RELA-217ENST00000531484 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
RELA-217ENST00000531484 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
RELA-217ENST00000531484 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
RELA-217ENST00000531484 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
RELA-217ENST00000531484 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.175e-7■■■■■ 31.2
RELA-217ENST00000531484 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
RELA-217ENST00000531484 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.17
RELA-217ENST00000531484 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.16
RELA-217ENST00000531484 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
RELA-217ENST00000531484 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
RELA-217ENST00000531484 KIF21BO75037 1637 aa16.05■□□□□ 0.16
RELA-217ENST00000531484 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
RELA-217ENST00000531484 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
RELA-217ENST00000531484 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
RELA-217ENST00000531484 IGF1RP08069 1367 aa16.01■□□□□ 0.15
RELA-217ENST00000531484 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
RELA-217ENST00000531484 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
RELA-217ENST00000531484 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
RELA-217ENST00000531484 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
RELA-217ENST00000531484 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
RELA-217ENST00000531484 RAPGEF2Q9Y4G8 1499 aa15.93■□□□□ 0.14
RELA-217ENST00000531484 RANGAP1P46060 587 aaPredicted RBP15.9■□□□□ 0.14
RELA-217ENST00000531484 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
RELA-217ENST00000531484 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
RELA-217ENST00000531484 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
RELA-217ENST00000531484 FBLN2P98095 1184 aa15.88■□□□□ 0.13
RELA-217ENST00000531484 PRXQ9BXM0 1461 aa15.88■□□□□ 0.13
RELA-217ENST00000531484 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms