RNA–Protein interactions for RNA: ENST00000531133.5
Retrieved 6 of 6 RNA–protein pairs in 13.8 ms
SERPING1-210, Transcript of serpin family G member 1, human
TSL 1 (best)
Gene SERPING1, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
SERPING1-210 | ENST00000531133 | IGF2BP1 | Q9NZI8 | 577 aa | Known RBP eCLIP | 8.82 | □□□□□ -1 | 1e-16 | ■■■■■ 55.5 |
SERPING1-210 | ENST00000531133 | LARP4 | Q71RC2 | 724 aa | Known RBP eCLIP | 8.19 | □□□□□ -1.1 | 3e-11 | ■■■■□ 22.4 |
SERPING1-210 | ENST00000531133 | PCBP2 | Q15366 | 365 aa | Known RBP eCLIP | 8.53 | □□□□□ -1.04 | 2e-8 | ■■■□□ 16.4 |
SERPING1-210 | ENST00000531133 | IGF2BP3 | O00425 | 579 aa | Known RBP eCLIP | 11.87 | □□□□□ -0.51 | 7e-8 | ■■■■□ 23 |
SERPING1-210 | ENST00000531133 | SND1 | Q7KZF4 | 910 aa | Known RBP eCLIP | 9.23 | □□□□□ -0.93 | 4e-7 | ■■■■□ 19.3 |
SERPING1-210 | ENST00000531133 | RPS3 | P23396 | 243 aa | Known RBP eCLIP | 8.67 | □□□□□ -1.02 | 9e-7 | ■■■■□ 19.6 |