RNA–Protein interactions for RNA: ENST00000530926.1

NPAT-204, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

TSL 3

Gene NPAT, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-204ENST00000530926 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
NPAT-204ENST00000530926 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
NPAT-204ENST00000530926 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
NPAT-204ENST00000530926 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
NPAT-204ENST00000530926 FOXD1Q16676 465 aa23.89■■□□□ 1.41
NPAT-204ENST00000530926 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
NPAT-204ENST00000530926 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
NPAT-204ENST00000530926 ADRA2BP18089 450 aa22.33■■□□□ 1.17
NPAT-204ENST00000530926 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
NPAT-204ENST00000530926 MSH5O43196 834 aa22.31■■□□□ 1.16
NPAT-204ENST00000530926 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
NPAT-204ENST00000530926 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
NPAT-204ENST00000530926 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
NPAT-204ENST00000530926 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
NPAT-204ENST00000530926 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
NPAT-204ENST00000530926 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
NPAT-204ENST00000530926 HOXD11P31277 338 aaPredicted RBP19.63■□□□□ 0.73
NPAT-204ENST00000530926 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
NPAT-204ENST00000530926 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
NPAT-204ENST00000530926 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
NPAT-204ENST00000530926 CACNB1Q02641 598 aaPredicted RBP19.09■□□□□ 0.65
NPAT-204ENST00000530926 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
NPAT-204ENST00000530926 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
NPAT-204ENST00000530926 DNAJC5BQ9UF47 199 aa18.94■□□□□ 0.62
NPAT-204ENST00000530926 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
NPAT-204ENST00000530926 KCNA4P22459 653 aa18.77■□□□□ 0.6
NPAT-204ENST00000530926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.58
NPAT-204ENST00000530926 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
NPAT-204ENST00000530926 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
NPAT-204ENST00000530926 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
NPAT-204ENST00000530926 CAPN15O75808 1086 aa17.98■□□□□ 0.47
NPAT-204ENST00000530926 DSG3P32926 999 aa17.88■□□□□ 0.45
NPAT-204ENST00000530926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
NPAT-204ENST00000530926 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
NPAT-204ENST00000530926 APLP2Q06481 763 aa17.79■□□□□ 0.44
NPAT-204ENST00000530926 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
NPAT-204ENST00000530926 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
NPAT-204ENST00000530926 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
NPAT-204ENST00000530926 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
NPAT-204ENST00000530926 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
NPAT-204ENST00000530926 ABCB7O75027 752 aa17.57■□□□□ 0.4
NPAT-204ENST00000530926 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
NPAT-204ENST00000530926 ZBTB22O15209 634 aa17.27■□□□□ 0.36
NPAT-204ENST00000530926 POLA2Q14181 598 aa17.26■□□□□ 0.35
NPAT-204ENST00000530926 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
NPAT-204ENST00000530926 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
NPAT-204ENST00000530926 POTEHQ6S545 545 aa16.98■□□□□ 0.31
NPAT-204ENST00000530926 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
NPAT-204ENST00000530926 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
NPAT-204ENST00000530926 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
NPAT-204ENST00000530926 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
NPAT-204ENST00000530926 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
NPAT-204ENST00000530926 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
NPAT-204ENST00000530926 FBLN2P98095 1184 aa16.53■□□□□ 0.24
NPAT-204ENST00000530926 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
NPAT-204ENST00000530926 MKRN4PQ13434 485 aaPredicted RBP16.44■□□□□ 0.22
NPAT-204ENST00000530926 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
NPAT-204ENST00000530926 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
NPAT-204ENST00000530926 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
NPAT-204ENST00000530926 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
NPAT-204ENST00000530926 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
NPAT-204ENST00000530926 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
NPAT-204ENST00000530926 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
NPAT-204ENST00000530926 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
NPAT-204ENST00000530926 SSUH2Q9Y2M2 353 aa16.2■□□□□ 0.18
NPAT-204ENST00000530926 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
NPAT-204ENST00000530926 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
NPAT-204ENST00000530926 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
NPAT-204ENST00000530926 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
NPAT-204ENST00000530926 HAX1O00165 279 aa15.94■□□□□ 0.14
NPAT-204ENST00000530926 PRKAR2AP13861 404 aaKnown RBP15.91■□□□□ 0.14
NPAT-204ENST00000530926 PRR29P0C7W0 189 aa15.81■□□□□ 0.12
NPAT-204ENST00000530926 EVX2Q03828 476 aa15.77■□□□□ 0.12
NPAT-204ENST00000530926 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
NPAT-204ENST00000530926 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
NPAT-204ENST00000530926 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
NPAT-204ENST00000530926 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
NPAT-204ENST00000530926 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
NPAT-204ENST00000530926 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
NPAT-204ENST00000530926 GABBR2O75899 941 aa15.41■□□□□ 0.06
NPAT-204ENST00000530926 CD44P16070 742 aaKnown RBP15.41■□□□□ 0.06
NPAT-204ENST00000530926 PROM2Q8N271 834 aa15.35■□□□□ 0.05
NPAT-204ENST00000530926 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
NPAT-204ENST00000530926 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
NPAT-204ENST00000530926 CLCN6P51797 869 aa15.2■□□□□ 0.02
NPAT-204ENST00000530926 ZNF579Q8NAF0 562 aaKnown RBP15.18■□□□□ 0.02
NPAT-204ENST00000530926 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
NPAT-204ENST00000530926 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
NPAT-204ENST00000530926 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
NPAT-204ENST00000530926 GALR2O43603 387 aaPredicted RBP15□□□□□ -0.01
NPAT-204ENST00000530926 DCBLD2Q96PD2 775 aa15□□□□□ -0.01
NPAT-204ENST00000530926 PHF12Q96QT6 1004 aa15□□□□□ -0.01
NPAT-204ENST00000530926 FKBP8Q14318 412 aa14.98□□□□□ -0.01
NPAT-204ENST00000530926 LHX8Q68G74 356 aa14.97□□□□□ -0.01
NPAT-204ENST00000530926 MIER1Q8N108 512 aa14.96□□□□□ -0.01
NPAT-204ENST00000530926 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
NPAT-204ENST00000530926 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
NPAT-204ENST00000530926 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
NPAT-204ENST00000530926 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
NPAT-204ENST00000530926 MS4A3Q96HJ5 214 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms