RNA–Protein interactions for RNA: ENST00000530925.5

SERGEF-214, Transcript of secretion regulating guanine nucleotide exchange factor, humanhuman

TSL 3

Gene SERGEF, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERGEF-214ENST00000530925 QKIQ96PU8 341 aaKnown RBP eCLIP22.68■■□□□ 1.223e-23■■■■■ 130.9
SERGEF-214ENST00000530925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.26■■□□□ 1.474e-6■■■■■ 111.8
SERGEF-214ENST00000530925 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.24■■□□□ 1.152e-11■■■■■ 71.9
SERGEF-214ENST00000530925 SF3B1O75533 1304 aaKnown RBP eCLIP24.88■■□□□ 1.574e-8■■■■■ 68.9
SERGEF-214ENST00000530925 DKC1O60832 514 aaKnown RBP eCLIP25.52■■□□□ 1.683e-15■■■■■ 68.7
SERGEF-214ENST00000530925 PCBP2Q15366 365 aaKnown RBP eCLIP21.36■■□□□ 1.013e-13■■■■■ 54.8
SERGEF-214ENST00000530925 GTF2F1P35269 517 aaKnown RBP eCLIP25.15■■□□□ 1.624e-7■■■■■ 39.6
SERGEF-214ENST00000530925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.87■■■■□ 3.172e-9■■■■■ 39.6
SERGEF-214ENST00000530925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.33■■□□□ 1.014e-11■■■■■ 30.9
SERGEF-214ENST00000530925 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.54■■■□□ 25e-7■■■■■ 29.1
SERGEF-214ENST00000530925 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.26■■□□□ 1.311e-7■■■■■ 28.7
SERGEF-214ENST00000530925 PRPF4O43172 522 aaKnown RBP eCLIP21.64■■□□□ 1.051e-8■■■■□ 24.8
SERGEF-214ENST00000530925 RBFOX2O43251 390 aaKnown RBP eCLIP17.53■□□□□ 0.47e-7■■■■□ 22.6
SERGEF-214ENST00000530925 TARDBPQ13148 414 aaKnown RBP eCLIP22.7■■□□□ 1.223e-6■■■■□ 20.8
SERGEF-214ENST00000530925 FUSP35637 526 aaKnown RBP eCLIP15.25■□□□□ 0.034e-8■■■■□ 20.5
SERGEF-214ENST00000530925 KHSRPQ92945 711 aaKnown RBP eCLIP24.89■■□□□ 1.582e-7■■■■□ 20.4
SERGEF-214ENST00000530925 PTBP1P26599 531 aaKnown RBP eCLIP17.33■□□□□ 0.363e-8■■■□□ 18.7
SERGEF-214ENST00000530925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.4■□□□□ 0.74e-7■■■□□ 17.3
SERGEF-214ENST00000530925 TAF15Q92804 592 aaKnown RBP eCLIP18.63■□□□□ 0.576e-7■■■□□ 17.2
SERGEF-214ENST00000530925 SF3A3Q12874 501 aaKnown RBP eCLIP20.2■□□□□ 0.823e-7■■■□□ 17.2
SERGEF-214ENST00000530925 HNRNPMP52272 730 aaKnown RBP eCLIP35.95■■■■□ 3.357e-7■■■□□ 17
SERGEF-214ENST00000530925 CDC40O60508 579 aaKnown RBP eCLIP20.98■□□□□ 0.955e-7■■■□□ 15.4
SERGEF-214ENST00000530925 HNRNPLP14866 589 aaKnown RBP eCLIP23.71■■□□□ 1.391e-6■■□□□ 12.8
SERGEF-214ENST00000530925 EFTUD2Q15029 972 aaKnown RBP eCLIP21.61■■□□□ 1.051e-16■■□□□ 12.4
SERGEF-214ENST00000530925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.89■■■□□ 2.541e-6■■□□□ 12.3
SERGEF-214ENST00000530925 SRSF1Q07955 248 aaKnown RBP eCLIP21.31■■□□□ 14e-6■■□□□ 12
SERGEF-214ENST00000530925 PPIGQ13427 754 aaKnown RBP eCLIP26.09■■□□□ 1.772e-7■■□□□ 11.5
SERGEF-214ENST00000530925 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.05■■□□□ 1.765e-9■■□□□ 11.4
SERGEF-214ENST00000530925 NCBP2P52298 156 aaKnown RBP eCLIP20.88■□□□□ 0.933e-7■□□□□ 11
SERGEF-214ENST00000530925 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.2■□□□□ 0.987e-7■□□□□ 11
SERGEF-214ENST00000530925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.56■■□□□ 1.522e-20■□□□□ 10.3
SERGEF-214ENST00000530925 U2AF2P26368 475 aaKnown RBP eCLIP25.44■■□□□ 1.662e-6■□□□□ 9.6
SERGEF-214ENST00000530925 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.56■■□□□ 1.361e-6■□□□□ 9.6
SERGEF-214ENST00000530925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.47■■□□□ 1.193e-6■□□□□ 9
Retrieved 34 of 34 RNA–protein pairs in 10.5 ms