RNA–Protein interactions for RNA: ENST00000529572.5

RCOR3-212, Transcript of REST corepressor 3, humanhuman

TSL 5

Gene RCOR3, Length 1,022 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-212ENST00000529572 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
RCOR3-212ENST00000529572 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
RCOR3-212ENST00000529572 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
RCOR3-212ENST00000529572 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
RCOR3-212ENST00000529572 FOXD1Q16676 465 aa20.04■□□□□ 0.8
RCOR3-212ENST00000529572 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
RCOR3-212ENST00000529572 MSH5O43196 834 aa18.78■□□□□ 0.6
RCOR3-212ENST00000529572 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
RCOR3-212ENST00000529572 PPP6R1Q9UPN7 881 aa18.78■□□□□ 0.6
RCOR3-212ENST00000529572 ADRA2BP18089 450 aa18.75■□□□□ 0.59
RCOR3-212ENST00000529572 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
RCOR3-212ENST00000529572 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
RCOR3-212ENST00000529572 MAPK8IP2Q13387 824 aaPredicted RBP17.2■□□□□ 0.34
RCOR3-212ENST00000529572 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
RCOR3-212ENST00000529572 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
RCOR3-212ENST00000529572 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
RCOR3-212ENST00000529572 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
RCOR3-212ENST00000529572 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
RCOR3-212ENST00000529572 RNF216Q9NWF9 866 aaPredicted RBP16.37■□□□□ 0.21
RCOR3-212ENST00000529572 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
RCOR3-212ENST00000529572 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
RCOR3-212ENST00000529572 RNF39Q9H2S5 420 aa16■□□□□ 0.15
RCOR3-212ENST00000529572 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
RCOR3-212ENST00000529572 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
RCOR3-212ENST00000529572 C1QBPQ07021 282 aaKnown RBP15.8■□□□□ 0.12
RCOR3-212ENST00000529572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.115e-6■□□□□ 11.2
RCOR3-212ENST00000529572 KCNA4P22459 653 aa15.73■□□□□ 0.11
RCOR3-212ENST00000529572 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
RCOR3-212ENST00000529572 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
RCOR3-212ENST00000529572 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
RCOR3-212ENST00000529572 CAPN15O75808 1086 aa15.15■□□□□ 0.02
RCOR3-212ENST00000529572 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
RCOR3-212ENST00000529572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
RCOR3-212ENST00000529572 APLP2Q06481 763 aa15.01□□□□□ -0.01
RCOR3-212ENST00000529572 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
RCOR3-212ENST00000529572 DSG3P32926 999 aa15□□□□□ -0.01
RCOR3-212ENST00000529572 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
RCOR3-212ENST00000529572 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
RCOR3-212ENST00000529572 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
RCOR3-212ENST00000529572 ZNF219Q9P2Y4 722 aaPredicted RBP14.89□□□□□ -0.03
RCOR3-212ENST00000529572 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
RCOR3-212ENST00000529572 ABCB7O75027 752 aa14.79□□□□□ -0.04
RCOR3-212ENST00000529572 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
RCOR3-212ENST00000529572 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
RCOR3-212ENST00000529572 POLA2Q14181 598 aa14.53□□□□□ -0.08
RCOR3-212ENST00000529572 ZBTB22O15209 634 aa14.44□□□□□ -0.1
RCOR3-212ENST00000529572 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
RCOR3-212ENST00000529572 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
RCOR3-212ENST00000529572 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
RCOR3-212ENST00000529572 POTEHQ6S545 545 aa14.3□□□□□ -0.12
RCOR3-212ENST00000529572 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
RCOR3-212ENST00000529572 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
RCOR3-212ENST00000529572 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
RCOR3-212ENST00000529572 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
RCOR3-212ENST00000529572 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
RCOR3-212ENST00000529572 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
RCOR3-212ENST00000529572 FBLN2P98095 1184 aa13.93□□□□□ -0.18
RCOR3-212ENST00000529572 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
RCOR3-212ENST00000529572 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
RCOR3-212ENST00000529572 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
RCOR3-212ENST00000529572 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
RCOR3-212ENST00000529572 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
RCOR3-212ENST00000529572 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
RCOR3-212ENST00000529572 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
RCOR3-212ENST00000529572 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
RCOR3-212ENST00000529572 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
RCOR3-212ENST00000529572 FXR2P51116 673 aaKnown RBP eCLIP13.58□□□□□ -0.24
RCOR3-212ENST00000529572 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
RCOR3-212ENST00000529572 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
RCOR3-212ENST00000529572 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
RCOR3-212ENST00000529572 HAX1O00165 279 aa13.46□□□□□ -0.25
RCOR3-212ENST00000529572 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
RCOR3-212ENST00000529572 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
RCOR3-212ENST00000529572 PRKAR2AP13861 404 aaKnown RBP13.39□□□□□ -0.27
RCOR3-212ENST00000529572 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
RCOR3-212ENST00000529572 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
RCOR3-212ENST00000529572 EVX2Q03828 476 aa13.22□□□□□ -0.29
RCOR3-212ENST00000529572 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
RCOR3-212ENST00000529572 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
RCOR3-212ENST00000529572 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
RCOR3-212ENST00000529572 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
RCOR3-212ENST00000529572 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RCOR3-212ENST00000529572 GABBR2O75899 941 aa12.97□□□□□ -0.33
RCOR3-212ENST00000529572 CD44P16070 742 aaKnown RBP12.97□□□□□ -0.33
RCOR3-212ENST00000529572 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
RCOR3-212ENST00000529572 PROM2Q8N271 834 aa12.81□□□□□ -0.36
RCOR3-212ENST00000529572 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
RCOR3-212ENST00000529572 CLCN6P51797 869 aa12.8□□□□□ -0.36
RCOR3-212ENST00000529572 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
RCOR3-212ENST00000529572 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
RCOR3-212ENST00000529572 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
RCOR3-212ENST00000529572 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
RCOR3-212ENST00000529572 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
RCOR3-212ENST00000529572 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
RCOR3-212ENST00000529572 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
RCOR3-212ENST00000529572 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
RCOR3-212ENST00000529572 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
RCOR3-212ENST00000529572 LHX8Q68G74 356 aa12.61□□□□□ -0.39
RCOR3-212ENST00000529572 MIER1Q8N108 512 aa12.61□□□□□ -0.39
RCOR3-212ENST00000529572 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms