RNA–Protein interactions for RNA: ENST00000529462.5

SLC39A4-205, Transcript of solute carrier family 39 member 4, humanhuman

TSL 2

Gene SLC39A4, Length 2,778 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-205ENST00000529462 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
SLC39A4-205ENST00000529462 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
SLC39A4-205ENST00000529462 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
SLC39A4-205ENST00000529462 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SLC39A4-205ENST00000529462 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
SLC39A4-205ENST00000529462 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
SLC39A4-205ENST00000529462 ABCC9O60706 1549 aa27.32■■□□□ 1.96
SLC39A4-205ENST00000529462 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.92
SLC39A4-205ENST00000529462 MYO15BQ96JP2 1530 aa26.91■■□□□ 1.9
SLC39A4-205ENST00000529462 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
SLC39A4-205ENST00000529462 NACADO15069 1562 aa26.79■■□□□ 1.88
SLC39A4-205ENST00000529462 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
SLC39A4-205ENST00000529462 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
SLC39A4-205ENST00000529462 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
SLC39A4-205ENST00000529462 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
SLC39A4-205ENST00000529462 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.76
SLC39A4-205ENST00000529462 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
SLC39A4-205ENST00000529462 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
SLC39A4-205ENST00000529462 BICRAQ9NZM4 1560 aa25.79■■□□□ 1.72
SLC39A4-205ENST00000529462 WIZO95785 1651 aa25.74■■□□□ 1.71
SLC39A4-205ENST00000529462 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
SLC39A4-205ENST00000529462 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
SLC39A4-205ENST00000529462 TOP2AP11388 1531 aaKnown RBP25.31■■□□□ 1.64
SLC39A4-205ENST00000529462 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
SLC39A4-205ENST00000529462 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
SLC39A4-205ENST00000529462 LOC105371045A0A1W2PR82 267 aa25.16■■□□□ 1.62
SLC39A4-205ENST00000529462 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
SLC39A4-205ENST00000529462 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
SLC39A4-205ENST00000529462 PEG3Q9GZU2 1588 aa25.12■■□□□ 1.61
SLC39A4-205ENST00000529462 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
SLC39A4-205ENST00000529462 BAZ1BQ9UIG0 1483 aaKnown RBP25.03■■□□□ 1.6
SLC39A4-205ENST00000529462 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
SLC39A4-205ENST00000529462 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
SLC39A4-205ENST00000529462 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
SLC39A4-205ENST00000529462 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
SLC39A4-205ENST00000529462 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
SLC39A4-205ENST00000529462 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
SLC39A4-205ENST00000529462 HRCP23327 699 aa24.59■■□□□ 1.53
SLC39A4-205ENST00000529462 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
SLC39A4-205ENST00000529462 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
SLC39A4-205ENST00000529462 SOGA1O94964 1423 aa24.53■■□□□ 1.52
SLC39A4-205ENST00000529462 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
SLC39A4-205ENST00000529462 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
SLC39A4-205ENST00000529462 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SLC39A4-205ENST00000529462 CFTRP13569 1480 aa24.37■■□□□ 1.49
SLC39A4-205ENST00000529462 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
SLC39A4-205ENST00000529462 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
SLC39A4-205ENST00000529462 EEA1Q15075 1411 aa24.25■■□□□ 1.47
SLC39A4-205ENST00000529462 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
SLC39A4-205ENST00000529462 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
SLC39A4-205ENST00000529462 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
SLC39A4-205ENST00000529462 CUX1P39880 1505 aa24.18■■□□□ 1.46
SLC39A4-205ENST00000529462 BIVM-ERCC5R4GMW8 1640 aa24.14■■□□□ 1.46
SLC39A4-205ENST00000529462 NESP48681 1621 aa24.1■■□□□ 1.45
SLC39A4-205ENST00000529462 PRDM2Q13029 1718 aa24.08■■□□□ 1.45
SLC39A4-205ENST00000529462 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
SLC39A4-205ENST00000529462 TNIKQ9UKE5 1360 aa24.07■■□□□ 1.44
SLC39A4-205ENST00000529462 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
SLC39A4-205ENST00000529462 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
SLC39A4-205ENST00000529462 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
SLC39A4-205ENST00000529462 CEP162Q5TB80 1403 aa24.02■■□□□ 1.44
SLC39A4-205ENST00000529462 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
SLC39A4-205ENST00000529462 RANGAP1P46060 587 aaPredicted RBP23.95■■□□□ 1.42
SLC39A4-205ENST00000529462 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
SLC39A4-205ENST00000529462 KIF21BO75037 1637 aa23.92■■□□□ 1.42
SLC39A4-205ENST00000529462 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
SLC39A4-205ENST00000529462 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
SLC39A4-205ENST00000529462 MYT1Q01538 1121 aa23.86■■□□□ 1.41
SLC39A4-205ENST00000529462 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
SLC39A4-205ENST00000529462 CUX2O14529 1486 aa23.84■■□□□ 1.41
SLC39A4-205ENST00000529462 TTBK1Q5TCY1 1321 aaPredicted RBP23.82■■□□□ 1.4
SLC39A4-205ENST00000529462 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
SLC39A4-205ENST00000529462 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
SLC39A4-205ENST00000529462 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
SLC39A4-205ENST00000529462 RAD54L2Q9Y4B4 1467 aa23.76■■□□□ 1.39
SLC39A4-205ENST00000529462 CLIP1P30622 1438 aa23.76■■□□□ 1.39
SLC39A4-205ENST00000529462 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
SLC39A4-205ENST00000529462 IGF1RP08069 1367 aa23.75■■□□□ 1.39
SLC39A4-205ENST00000529462 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
SLC39A4-205ENST00000529462 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
SLC39A4-205ENST00000529462 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
SLC39A4-205ENST00000529462 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
SLC39A4-205ENST00000529462 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
SLC39A4-205ENST00000529462 ABCA10Q8WWZ4 1543 aa23.58■■□□□ 1.37
SLC39A4-205ENST00000529462 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
SLC39A4-205ENST00000529462 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-205ENST00000529462 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
SLC39A4-205ENST00000529462 APLP2Q06481 763 aa23.5■■□□□ 1.35
SLC39A4-205ENST00000529462 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
SLC39A4-205ENST00000529462 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
SLC39A4-205ENST00000529462 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
SLC39A4-205ENST00000529462 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.33
SLC39A4-205ENST00000529462 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
SLC39A4-205ENST00000529462 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
SLC39A4-205ENST00000529462 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.33
SLC39A4-205ENST00000529462 ERCC6Q03468 1493 aa23.33■■□□□ 1.32
SLC39A4-205ENST00000529462 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
SLC39A4-205ENST00000529462 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.322e-8■■■■■ 28.7
SLC39A4-205ENST00000529462 CUL7Q14999 1698 aa23.29■■□□□ 1.32
SLC39A4-205ENST00000529462 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms