RNA–Protein interactions for RNA: ENST00000529424.2

RECQL4-203, Transcript of RecQ like helicase 4, humanhuman

TSL 2

Gene RECQL4, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-203ENST00000529424 NISCHQ9Y2I1 1504 aa27.97■■■□□ 2.07
RECQL4-203ENST00000529424 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
RECQL4-203ENST00000529424 ABCC9O60706 1549 aa24.57■■□□□ 1.52
RECQL4-203ENST00000529424 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
RECQL4-203ENST00000529424 NACADO15069 1562 aa23.48■■□□□ 1.35
RECQL4-203ENST00000529424 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
RECQL4-203ENST00000529424 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
RECQL4-203ENST00000529424 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
RECQL4-203ENST00000529424 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
RECQL4-203ENST00000529424 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
RECQL4-203ENST00000529424 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.274e-7■■■■■ 47.4
RECQL4-203ENST00000529424 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
RECQL4-203ENST00000529424 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
RECQL4-203ENST00000529424 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
RECQL4-203ENST00000529424 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
RECQL4-203ENST00000529424 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
RECQL4-203ENST00000529424 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
RECQL4-203ENST00000529424 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
RECQL4-203ENST00000529424 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
RECQL4-203ENST00000529424 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
RECQL4-203ENST00000529424 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
RECQL4-203ENST00000529424 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
RECQL4-203ENST00000529424 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
RECQL4-203ENST00000529424 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
RECQL4-203ENST00000529424 PEG3Q9GZU2 1588 aa21.55■■□□□ 1.04
RECQL4-203ENST00000529424 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
RECQL4-203ENST00000529424 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
RECQL4-203ENST00000529424 WIZO95785 1651 aa21.34■■□□□ 1.01
RECQL4-203ENST00000529424 NESP48681 1621 aa21.26■□□□□ 0.99
RECQL4-203ENST00000529424 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
RECQL4-203ENST00000529424 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
RECQL4-203ENST00000529424 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
RECQL4-203ENST00000529424 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
RECQL4-203ENST00000529424 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
RECQL4-203ENST00000529424 CUX2O14529 1486 aa21.01■□□□□ 0.95
RECQL4-203ENST00000529424 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
RECQL4-203ENST00000529424 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
RECQL4-203ENST00000529424 THOC2Q8NI27 1593 aaKnown RBP20.94■□□□□ 0.94
RECQL4-203ENST00000529424 CFTRP13569 1480 aa20.88■□□□□ 0.93
RECQL4-203ENST00000529424 CCDC88BA6NC98 1476 aa20.84■□□□□ 0.93
RECQL4-203ENST00000529424 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
RECQL4-203ENST00000529424 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
RECQL4-203ENST00000529424 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
RECQL4-203ENST00000529424 WDR62O43379 1518 aa20.73■□□□□ 0.91
RECQL4-203ENST00000529424 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
RECQL4-203ENST00000529424 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
RECQL4-203ENST00000529424 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
RECQL4-203ENST00000529424 SUPT5HO00267 1087 aaKnown RBP20.5■□□□□ 0.87
RECQL4-203ENST00000529424 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
RECQL4-203ENST00000529424 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
RECQL4-203ENST00000529424 DNMBPQ6XZF7 1577 aa20.37■□□□□ 0.85
RECQL4-203ENST00000529424 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
RECQL4-203ENST00000529424 IFT140Q96RY7 1462 aa20.31■□□□□ 0.84
RECQL4-203ENST00000529424 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
RECQL4-203ENST00000529424 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
RECQL4-203ENST00000529424 CUX1P39880 1505 aa20.23■□□□□ 0.83
RECQL4-203ENST00000529424 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
RECQL4-203ENST00000529424 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
RECQL4-203ENST00000529424 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
RECQL4-203ENST00000529424 SOGA1O94964 1423 aa20.16■□□□□ 0.82
RECQL4-203ENST00000529424 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
RECQL4-203ENST00000529424 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
RECQL4-203ENST00000529424 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
RECQL4-203ENST00000529424 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
RECQL4-203ENST00000529424 CHD1O14646 1710 aa19.99■□□□□ 0.79
RECQL4-203ENST00000529424 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
RECQL4-203ENST00000529424 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
RECQL4-203ENST00000529424 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
RECQL4-203ENST00000529424 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
RECQL4-203ENST00000529424 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
RECQL4-203ENST00000529424 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
RECQL4-203ENST00000529424 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
RECQL4-203ENST00000529424 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
RECQL4-203ENST00000529424 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
RECQL4-203ENST00000529424 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
RECQL4-203ENST00000529424 MAGI1Q96QZ7 1491 aaPredicted RBP19.88■□□□□ 0.77
RECQL4-203ENST00000529424 FBLN2P98095 1184 aa19.88■□□□□ 0.77
RECQL4-203ENST00000529424 RIMBP3CA6NJZ7 1639 aa19.85■□□□□ 0.77
RECQL4-203ENST00000529424 RIMBP3BA6NNM3 1639 aa19.85■□□□□ 0.77
RECQL4-203ENST00000529424 RIMBP3Q9UFD9 1639 aa19.85■□□□□ 0.77
RECQL4-203ENST00000529424 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
RECQL4-203ENST00000529424 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
RECQL4-203ENST00000529424 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
RECQL4-203ENST00000529424 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
RECQL4-203ENST00000529424 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
RECQL4-203ENST00000529424 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
RECQL4-203ENST00000529424 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
RECQL4-203ENST00000529424 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
RECQL4-203ENST00000529424 FHAD1B1AJZ9 1412 aa19.67■□□□□ 0.74
RECQL4-203ENST00000529424 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
RECQL4-203ENST00000529424 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
RECQL4-203ENST00000529424 NUP160Q12769 1436 aa19.62■□□□□ 0.73
RECQL4-203ENST00000529424 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
RECQL4-203ENST00000529424 IGF1RP08069 1367 aa19.6■□□□□ 0.73
RECQL4-203ENST00000529424 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
RECQL4-203ENST00000529424 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
RECQL4-203ENST00000529424 ERCC6L2Q5T890 1561 aa19.52■□□□□ 0.71
RECQL4-203ENST00000529424 CUL7Q14999 1698 aa19.47■□□□□ 0.71
RECQL4-203ENST00000529424 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
RECQL4-203ENST00000529424 JPH4Q96JJ6 628 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms