RNA–Protein interactions for RNA: ENST00000529156.1

FNBP4-208, Transcript of formin binding protein 4, human

TSL 3

Gene FNBP4, Length 344 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FNBP4-208	ENST00000529156	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.15	□□□□□ -1.75	2e-20	■■■□□ 19.1
FNBP4-208	ENST00000529156	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	-1.57	□□□□□ -2.66	8e-17	■■■□□ 16.1
FNBP4-208	ENST00000529156	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	3.37	□□□□□ -1.87	4e-14	■■■■□ 21.9
FNBP4-208	ENST00000529156	ZNF622	Q969S3	477 aa	Known RBP eCLIP	3.37	□□□□□ -1.87	1e-13	■■□□□ 11.6
FNBP4-208	ENST00000529156	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.93	□□□□□ -0.34	1e-10	■□□□□ 9.7
FNBP4-208	ENST00000529156	PPIG	Q13427	754 aa	Known RBP eCLIP	3.35	□□□□□ -1.87	1e-10	■□□□□ 10.8
FNBP4-208	ENST00000529156	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.48	□□□□□ -0.89	1e-10	■■■□□ 14.6
FNBP4-208	ENST00000529156	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.99	□□□□□ -1.61	7e-10	■□□□□ 9.5
FNBP4-208	ENST00000529156	RBM22	Q9NW64	420 aa	Known RBP eCLIP	1.41	□□□□□ -2.18	2e-9	■□□□□ 9.4
FNBP4-208	ENST00000529156	U2AF2	P26368	475 aa	Known RBP eCLIP	1.78	□□□□□ -2.12	2e-9	■■■■■ 55.9
FNBP4-208	ENST00000529156	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.87	□□□□□ -1.47	4e-9	■□□□□ 10.2
FNBP4-208	ENST00000529156	EFTUD2	Q15029	972 aa	Known RBP eCLIP	3.14	□□□□□ -1.91	5e-9	■□□□□ 9.1
FNBP4-208	ENST00000529156	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.14	□□□□□ -1.27	1e-8	■■■■□ 21.7
FNBP4-208	ENST00000529156	KHSRP	Q92945	711 aa	Known RBP eCLIP	8.79	□□□□□ -1	1e-8	■□□□□ 10.6
FNBP4-208	ENST00000529156	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.06	□□□□□ -1.92	5e-8	■■■■□ 19.5
FNBP4-208	ENST00000529156	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.54	□□□□□ -1.36	1e-7	■■■□□ 15.1
FNBP4-208	ENST00000529156	SF3B4	Q15427	424 aa	Known RBP eCLIP	3.66	□□□□□ -1.82	1e-7	■■□□□ 14.2
FNBP4-208	ENST00000529156	CDC40	O60508	579 aa	Known RBP eCLIP	1.8	□□□□□ -2.12	2e-7	■■□□□ 11.9
FNBP4-208	ENST00000529156	AQR	O60306	1485 aa	Known RBP eCLIP	1.32	□□□□□ -2.2	3e-7	■□□□□ 10.5
FNBP4-208	ENST00000529156	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.76	□□□□□ -1.65	4e-7	■■■■■ 27.4
FNBP4-208	ENST00000529156	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.3	□□□□□ -1.72	6e-7	■□□□□ 8.8
FNBP4-208	ENST00000529156	SF3B1	O75533	1304 aa	Known RBP eCLIP	2.29	□□□□□ -2.04	3e-6	■■■■■ 137.9
FNBP4-208	ENST00000529156	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	2.25	□□□□□ -2.05	3e-6	■■■□□ 15
FNBP4-208	ENST00000529156	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.39	□□□□□ -1.71	5e-6	■■■■□ 19.9
FNBP4-208	ENST00000529156	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.81	□□□□□ -1.64	5e-6	■■■□□ 15.5
FNBP4-208	ENST00000529156	TIA1	P31483	386 aa	Known RBP eCLIP	3.01	□□□□□ -1.93	5e-6	■■■■□ 21.8

Retrieved 26 of 26 RNA–protein pairs in 7 ms