RNA–Protein interactions for RNA: ENST00000528952.1

MS4A3-207, Transcript of membrane spanning 4-domains A3, humanhuman

TSL 2

Gene MS4A3, Length 923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3-207ENST00000528952 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
MS4A3-207ENST00000528952 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
MS4A3-207ENST00000528952 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
MS4A3-207ENST00000528952 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
MS4A3-207ENST00000528952 FOXD1Q16676 465 aa21.76■■□□□ 1.07
MS4A3-207ENST00000528952 POTEDQ86YR6 584 aa20.88■□□□□ 0.93
MS4A3-207ENST00000528952 MSH5O43196 834 aa20.45■□□□□ 0.86
MS4A3-207ENST00000528952 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
MS4A3-207ENST00000528952 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
MS4A3-207ENST00000528952 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
MS4A3-207ENST00000528952 ADRA2BP18089 450 aa19.86■□□□□ 0.77
MS4A3-207ENST00000528952 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
MS4A3-207ENST00000528952 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
MS4A3-207ENST00000528952 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
MS4A3-207ENST00000528952 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
MS4A3-207ENST00000528952 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
MS4A3-207ENST00000528952 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
MS4A3-207ENST00000528952 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
MS4A3-207ENST00000528952 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
MS4A3-207ENST00000528952 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
MS4A3-207ENST00000528952 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
MS4A3-207ENST00000528952 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
MS4A3-207ENST00000528952 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
MS4A3-207ENST00000528952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
MS4A3-207ENST00000528952 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
MS4A3-207ENST00000528952 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
MS4A3-207ENST00000528952 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
MS4A3-207ENST00000528952 POTEHQ6S545 545 aa16.23■□□□□ 0.19
MS4A3-207ENST00000528952 DSG3P32926 999 aa16.21■□□□□ 0.19
MS4A3-207ENST00000528952 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
MS4A3-207ENST00000528952 CAPN15O75808 1086 aa16.07■□□□□ 0.16
MS4A3-207ENST00000528952 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
MS4A3-207ENST00000528952 ABCB7O75027 752 aa15.71■□□□□ 0.11
MS4A3-207ENST00000528952 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
MS4A3-207ENST00000528952 KCNA4P22459 653 aa15.69■□□□□ 0.1
MS4A3-207ENST00000528952 ZNF219Q9P2Y4 722 aaPredicted RBP15.66■□□□□ 0.1
MS4A3-207ENST00000528952 APLP2Q06481 763 aa15.58■□□□□ 0.08
MS4A3-207ENST00000528952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
MS4A3-207ENST00000528952 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
MS4A3-207ENST00000528952 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
MS4A3-207ENST00000528952 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
MS4A3-207ENST00000528952 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
MS4A3-207ENST00000528952 POLA2Q14181 598 aa15.22■□□□□ 0.03
MS4A3-207ENST00000528952 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
MS4A3-207ENST00000528952 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
MS4A3-207ENST00000528952 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
MS4A3-207ENST00000528952 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
MS4A3-207ENST00000528952 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
MS4A3-207ENST00000528952 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
MS4A3-207ENST00000528952 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
MS4A3-207ENST00000528952 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
MS4A3-207ENST00000528952 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
MS4A3-207ENST00000528952 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
MS4A3-207ENST00000528952 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
MS4A3-207ENST00000528952 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
MS4A3-207ENST00000528952 HAX1O00165 279 aa14.62□□□□□ -0.07
MS4A3-207ENST00000528952 EVX2Q03828 476 aa14.56□□□□□ -0.08
MS4A3-207ENST00000528952 ZBTB22O15209 634 aa14.49□□□□□ -0.09
MS4A3-207ENST00000528952 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
MS4A3-207ENST00000528952 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
MS4A3-207ENST00000528952 SPDYE2Q495Y8 402 aa14.36□□□□□ -0.11
MS4A3-207ENST00000528952 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
MS4A3-207ENST00000528952 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
MS4A3-207ENST00000528952 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
MS4A3-207ENST00000528952 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
MS4A3-207ENST00000528952 FBLN2P98095 1184 aa14.2□□□□□ -0.14
MS4A3-207ENST00000528952 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
MS4A3-207ENST00000528952 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
MS4A3-207ENST00000528952 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
MS4A3-207ENST00000528952 GABBR2O75899 941 aa14.13□□□□□ -0.15
MS4A3-207ENST00000528952 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.16
MS4A3-207ENST00000528952 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
MS4A3-207ENST00000528952 LHX8Q68G74 356 aa14.02□□□□□ -0.17
MS4A3-207ENST00000528952 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
MS4A3-207ENST00000528952 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
MS4A3-207ENST00000528952 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
MS4A3-207ENST00000528952 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
MS4A3-207ENST00000528952 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
MS4A3-207ENST00000528952 CLCN6P51797 869 aa13.66□□□□□ -0.22
MS4A3-207ENST00000528952 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
MS4A3-207ENST00000528952 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
MS4A3-207ENST00000528952 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
MS4A3-207ENST00000528952 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
MS4A3-207ENST00000528952 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
MS4A3-207ENST00000528952 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
MS4A3-207ENST00000528952 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
MS4A3-207ENST00000528952 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
MS4A3-207ENST00000528952 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
MS4A3-207ENST00000528952 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
MS4A3-207ENST00000528952 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
MS4A3-207ENST00000528952 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
MS4A3-207ENST00000528952 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
MS4A3-207ENST00000528952 POTEMA6NI47 508 aa13.22□□□□□ -0.29
MS4A3-207ENST00000528952 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
MS4A3-207ENST00000528952 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
MS4A3-207ENST00000528952 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
MS4A3-207ENST00000528952 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
MS4A3-207ENST00000528952 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
MS4A3-207ENST00000528952 MS4A3Q96HJ5 214 aa13.13□□□□□ -0.31
MS4A3-207ENST00000528952 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms