RNA–Protein interactions for RNA: ENST00000528602.1

GATD1-209, Transcript of glutamine amidotransferase like class 1 domain containing 1, humanhuman

TSL 2

Gene GATD1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATD1-209ENST00000528602 NISCHQ9Y2I1 1504 aa34.93■■■■□ 3.18
GATD1-209ENST00000528602 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
GATD1-209ENST00000528602 ABCC9O60706 1549 aa30.56■■■□□ 2.48
GATD1-209ENST00000528602 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
GATD1-209ENST00000528602 NACADO15069 1562 aa29.28■■■□□ 2.28
GATD1-209ENST00000528602 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
GATD1-209ENST00000528602 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.25
GATD1-209ENST00000528602 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
GATD1-209ENST00000528602 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
GATD1-209ENST00000528602 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
GATD1-209ENST00000528602 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
GATD1-209ENST00000528602 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
GATD1-209ENST00000528602 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
GATD1-209ENST00000528602 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
GATD1-209ENST00000528602 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
GATD1-209ENST00000528602 EIF4G1Q04637 1599 aaKnown RBP27.71■■■□□ 2.03
GATD1-209ENST00000528602 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
GATD1-209ENST00000528602 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
GATD1-209ENST00000528602 NCAPD3P42695 1498 aa27.11■■□□□ 1.93
GATD1-209ENST00000528602 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
GATD1-209ENST00000528602 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
GATD1-209ENST00000528602 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
GATD1-209ENST00000528602 SMARCA2P51531 1590 aa26.94■■□□□ 1.9
GATD1-209ENST00000528602 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
GATD1-209ENST00000528602 PEG3Q9GZU2 1588 aa26.88■■□□□ 1.89
GATD1-209ENST00000528602 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
GATD1-209ENST00000528602 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
GATD1-209ENST00000528602 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
GATD1-209ENST00000528602 WIZO95785 1651 aa26.52■■□□□ 1.84
GATD1-209ENST00000528602 NESP48681 1621 aa26.42■■□□□ 1.82
GATD1-209ENST00000528602 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
GATD1-209ENST00000528602 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
GATD1-209ENST00000528602 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
GATD1-209ENST00000528602 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
GATD1-209ENST00000528602 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
GATD1-209ENST00000528602 CUX2O14529 1486 aa26.17■■□□□ 1.78
GATD1-209ENST00000528602 CFTRP13569 1480 aa26.1■■□□□ 1.77
GATD1-209ENST00000528602 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
GATD1-209ENST00000528602 THOC2Q8NI27 1593 aaKnown RBP26.01■■□□□ 1.75
GATD1-209ENST00000528602 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
GATD1-209ENST00000528602 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
GATD1-209ENST00000528602 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
GATD1-209ENST00000528602 CEP164Q9UPV0 1460 aa25.87■■□□□ 1.73
GATD1-209ENST00000528602 WDR62O43379 1518 aa25.82■■□□□ 1.72
GATD1-209ENST00000528602 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
GATD1-209ENST00000528602 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
GATD1-209ENST00000528602 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
GATD1-209ENST00000528602 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
GATD1-209ENST00000528602 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
GATD1-209ENST00000528602 TOPBP1Q92547 1522 aa25.48■■□□□ 1.67
GATD1-209ENST00000528602 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
GATD1-209ENST00000528602 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
GATD1-209ENST00000528602 ZNF608Q9ULD9 1512 aaPredicted RBP25.29■■□□□ 1.64
GATD1-209ENST00000528602 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
GATD1-209ENST00000528602 CUX1P39880 1505 aa25.24■■□□□ 1.63
GATD1-209ENST00000528602 TARBP1Q13395 1621 aaKnown RBP25.21■■□□□ 1.63
GATD1-209ENST00000528602 SOGA1O94964 1423 aa25.19■■□□□ 1.62
GATD1-209ENST00000528602 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
GATD1-209ENST00000528602 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
GATD1-209ENST00000528602 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.611e-6■■■■□ 25.3
GATD1-209ENST00000528602 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
GATD1-209ENST00000528602 EIF4G3O43432 1585 aaKnown RBP25.08■■□□□ 1.61
GATD1-209ENST00000528602 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
GATD1-209ENST00000528602 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
GATD1-209ENST00000528602 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
GATD1-209ENST00000528602 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
GATD1-209ENST00000528602 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
GATD1-209ENST00000528602 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
GATD1-209ENST00000528602 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
GATD1-209ENST00000528602 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
GATD1-209ENST00000528602 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
GATD1-209ENST00000528602 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
GATD1-209ENST00000528602 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
GATD1-209ENST00000528602 FBLN2P98095 1184 aa24.8■■□□□ 1.56
GATD1-209ENST00000528602 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
GATD1-209ENST00000528602 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
GATD1-209ENST00000528602 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
GATD1-209ENST00000528602 CHD1O14646 1710 aa24.72■■□□□ 1.55
GATD1-209ENST00000528602 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
GATD1-209ENST00000528602 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
GATD1-209ENST00000528602 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
GATD1-209ENST00000528602 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
GATD1-209ENST00000528602 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
GATD1-209ENST00000528602 RIMBP3CA6NJZ7 1639 aa24.6■■□□□ 1.53
GATD1-209ENST00000528602 RIMBP3BA6NNM3 1639 aa24.6■■□□□ 1.53
GATD1-209ENST00000528602 RIMBP3Q9UFD9 1639 aa24.6■■□□□ 1.53
GATD1-209ENST00000528602 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
GATD1-209ENST00000528602 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
GATD1-209ENST00000528602 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
GATD1-209ENST00000528602 IGF1RP08069 1367 aa24.53■■□□□ 1.52
GATD1-209ENST00000528602 NUP160Q12769 1436 aa24.52■■□□□ 1.52
GATD1-209ENST00000528602 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
GATD1-209ENST00000528602 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
GATD1-209ENST00000528602 ARAP1Q96P48 1450 aa24.45■■□□□ 1.5
GATD1-209ENST00000528602 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
GATD1-209ENST00000528602 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
GATD1-209ENST00000528602 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
GATD1-209ENST00000528602 CUL7Q14999 1698 aa24.27■■□□□ 1.48
GATD1-209ENST00000528602 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
GATD1-209ENST00000528602 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms