RNA–Protein interactions for RNA: ENST00000528233.1

RSF1-IT1-201, RSF1 intronic transcript 1, humanhuman

TSL 2 BASIC

Gene RSF1-IT1, Length 632 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-IT1-201ENST00000528233 AEBP2Q6ZN18 517 aaPredicted RBP33.23■■■□□ 2.91
RSF1-IT1-201ENST00000528233 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
RSF1-IT1-201ENST00000528233 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
RSF1-IT1-201ENST00000528233 PHF23Q9BUL5 403 aaPredicted RBP28.06■■■□□ 2.08
RSF1-IT1-201ENST00000528233 FOXD1Q16676 465 aa26.46■■□□□ 1.83
RSF1-IT1-201ENST00000528233 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
RSF1-IT1-201ENST00000528233 MSH5O43196 834 aa24.86■■□□□ 1.57
RSF1-IT1-201ENST00000528233 PIAS4Q8N2W9 510 aaPredicted RBP24.8■■□□□ 1.56
RSF1-IT1-201ENST00000528233 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
RSF1-IT1-201ENST00000528233 ADRA2BP18089 450 aa24.66■■□□□ 1.54
RSF1-IT1-201ENST00000528233 POTEDQ86YR6 584 aa24.18■■□□□ 1.46
RSF1-IT1-201ENST00000528233 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
RSF1-IT1-201ENST00000528233 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
RSF1-IT1-201ENST00000528233 MAPK8IP2Q13387 824 aaPredicted RBP22.63■■□□□ 1.21
RSF1-IT1-201ENST00000528233 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
RSF1-IT1-201ENST00000528233 PPP4R3CPQ6ZMV5 832 aa22.17■■□□□ 1.14
RSF1-IT1-201ENST00000528233 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
RSF1-IT1-201ENST00000528233 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
RSF1-IT1-201ENST00000528233 HOXD11P31277 338 aaPredicted RBP21.69■■□□□ 1.06
RSF1-IT1-201ENST00000528233 RNF216Q9NWF9 866 aaPredicted RBP21.57■■□□□ 1.04
RSF1-IT1-201ENST00000528233 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
RSF1-IT1-201ENST00000528233 CACNB1Q02641 598 aaPredicted RBP21.34■■□□□ 1.01
RSF1-IT1-201ENST00000528233 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
RSF1-IT1-201ENST00000528233 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
RSF1-IT1-201ENST00000528233 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
RSF1-IT1-201ENST00000528233 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
RSF1-IT1-201ENST00000528233 ABCC9O60706 1549 aa20.95■□□□□ 0.94
RSF1-IT1-201ENST00000528233 C1QBPQ07021 282 aaKnown RBP20.9■□□□□ 0.94
RSF1-IT1-201ENST00000528233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.92
RSF1-IT1-201ENST00000528233 KCNA4P22459 653 aa20.58■□□□□ 0.89
RSF1-IT1-201ENST00000528233 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
RSF1-IT1-201ENST00000528233 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
RSF1-IT1-201ENST00000528233 SLC4A2P04920 1241 aa20.01■□□□□ 0.79
RSF1-IT1-201ENST00000528233 CAPN15O75808 1086 aa20■□□□□ 0.79
RSF1-IT1-201ENST00000528233 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
RSF1-IT1-201ENST00000528233 NACADO15069 1562 aa19.91■□□□□ 0.78
RSF1-IT1-201ENST00000528233 APLP2Q06481 763 aa19.85■□□□□ 0.77
RSF1-IT1-201ENST00000528233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
RSF1-IT1-201ENST00000528233 DSG3P32926 999 aa19.8■□□□□ 0.76
RSF1-IT1-201ENST00000528233 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
RSF1-IT1-201ENST00000528233 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
RSF1-IT1-201ENST00000528233 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
RSF1-IT1-201ENST00000528233 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
RSF1-IT1-201ENST00000528233 ZNF219Q9P2Y4 722 aaPredicted RBP19.65■□□□□ 0.74
RSF1-IT1-201ENST00000528233 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
RSF1-IT1-201ENST00000528233 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
RSF1-IT1-201ENST00000528233 ABCB7O75027 752 aa19.49■□□□□ 0.71
RSF1-IT1-201ENST00000528233 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
RSF1-IT1-201ENST00000528233 MYCNP04198 464 aaPredicted RBP19.48■□□□□ 0.71
RSF1-IT1-201ENST00000528233 PABPN1Q86U42 306 aaKnown RBP eCLIP19.48■□□□□ 0.71
RSF1-IT1-201ENST00000528233 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
RSF1-IT1-201ENST00000528233 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
RSF1-IT1-201ENST00000528233 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
RSF1-IT1-201ENST00000528233 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
RSF1-IT1-201ENST00000528233 FOXD4L1Q9NU39 408 aa19.27■□□□□ 0.68
RSF1-IT1-201ENST00000528233 POLA2Q14181 598 aa19.11■□□□□ 0.65
RSF1-IT1-201ENST00000528233 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
RSF1-IT1-201ENST00000528233 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
RSF1-IT1-201ENST00000528233 POTEHQ6S545 545 aa18.98■□□□□ 0.63
RSF1-IT1-201ENST00000528233 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
RSF1-IT1-201ENST00000528233 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
RSF1-IT1-201ENST00000528233 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
RSF1-IT1-201ENST00000528233 ATF5Q9Y2D1 282 aaPredicted RBP18.91■□□□□ 0.62
RSF1-IT1-201ENST00000528233 ZBTB22O15209 634 aa18.86■□□□□ 0.61
RSF1-IT1-201ENST00000528233 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
RSF1-IT1-201ENST00000528233 ATXN8OSP0DMR3 200 aa18.68■□□□□ 0.58
RSF1-IT1-201ENST00000528233 CHRDL2Q6WN34 429 aa18.52■□□□□ 0.56
RSF1-IT1-201ENST00000528233 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
RSF1-IT1-201ENST00000528233 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
RSF1-IT1-201ENST00000528233 NCAPD3P42695 1498 aa18.38■□□□□ 0.53
RSF1-IT1-201ENST00000528233 FBLN2P98095 1184 aa18.35■□□□□ 0.53
RSF1-IT1-201ENST00000528233 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
RSF1-IT1-201ENST00000528233 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
RSF1-IT1-201ENST00000528233 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
RSF1-IT1-201ENST00000528233 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
RSF1-IT1-201ENST00000528233 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
RSF1-IT1-201ENST00000528233 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
RSF1-IT1-201ENST00000528233 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
RSF1-IT1-201ENST00000528233 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
RSF1-IT1-201ENST00000528233 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
RSF1-IT1-201ENST00000528233 CUX2O14529 1486 aa18.18■□□□□ 0.5
RSF1-IT1-201ENST00000528233 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
RSF1-IT1-201ENST00000528233 DNAJC5Q9H3Z4 198 aa18.14■□□□□ 0.49
RSF1-IT1-201ENST00000528233 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
RSF1-IT1-201ENST00000528233 PITPNM1O00562 1244 aa18.11■□□□□ 0.49
RSF1-IT1-201ENST00000528233 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
RSF1-IT1-201ENST00000528233 MKRN4PQ13434 485 aaPredicted RBP18.05■□□□□ 0.48
RSF1-IT1-201ENST00000528233 PIP4P2Q8N4L2 257 aa18.05■□□□□ 0.48
RSF1-IT1-201ENST00000528233 CSRNP3Q8WYN3 585 aa18.04■□□□□ 0.48
RSF1-IT1-201ENST00000528233 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
RSF1-IT1-201ENST00000528233 NESP48681 1621 aa18■□□□□ 0.47
RSF1-IT1-201ENST00000528233 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
RSF1-IT1-201ENST00000528233 LAMC3Q9Y6N6 1575 aa17.96■□□□□ 0.47
RSF1-IT1-201ENST00000528233 FXR2P51116 673 aaKnown RBP eCLIP17.94■□□□□ 0.46
RSF1-IT1-201ENST00000528233 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
RSF1-IT1-201ENST00000528233 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
RSF1-IT1-201ENST00000528233 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
RSF1-IT1-201ENST00000528233 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
RSF1-IT1-201ENST00000528233 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
RSF1-IT1-201ENST00000528233 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms