RNA–Protein interactions for RNA: ENST00000528219.5

XRRA1-208, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 5

Gene XRRA1, Length 1,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-208ENST00000528219 NISCHQ9Y2I1 1504 aa41.05■■■■■ 4.16
XRRA1-208ENST00000528219 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
XRRA1-208ENST00000528219 ABCC9O60706 1549 aa35.89■■■■□ 3.34
XRRA1-208ENST00000528219 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.1
XRRA1-208ENST00000528219 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
XRRA1-208ENST00000528219 NACADO15069 1562 aa34.39■■■■□ 3.1
XRRA1-208ENST00000528219 MYO15BQ96JP2 1530 aa34.16■■■■□ 3.06
XRRA1-208ENST00000528219 ZCCHC6Q5VYS8 1495 aaKnown RBP34.16■■■■□ 3.06
XRRA1-208ENST00000528219 DCAF1Q9Y4B6 1507 aa33.96■■■■□ 3.03
XRRA1-208ENST00000528219 PABPN1Q86U42 306 aaKnown RBP eCLIP33.57■■■□□ 2.96
XRRA1-208ENST00000528219 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
XRRA1-208ENST00000528219 BICRAQ9NZM4 1560 aa33.4■■■□□ 2.94
XRRA1-208ENST00000528219 SCRIBQ14160 1630 aa33.3■■■□□ 2.92
XRRA1-208ENST00000528219 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
XRRA1-208ENST00000528219 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
XRRA1-208ENST00000528219 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
XRRA1-208ENST00000528219 CC2D2AQ9P2K1 1620 aa32.43■■■□□ 2.78
XRRA1-208ENST00000528219 CECR2Q9BXF3 1484 aa32.28■■■□□ 2.76
XRRA1-208ENST00000528219 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
XRRA1-208ENST00000528219 BAZ1AQ9NRL2 1556 aaPredicted RBP31.81■■■□□ 2.68
XRRA1-208ENST00000528219 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
XRRA1-208ENST00000528219 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
XRRA1-208ENST00000528219 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
XRRA1-208ENST00000528219 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
XRRA1-208ENST00000528219 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
XRRA1-208ENST00000528219 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
XRRA1-208ENST00000528219 BAZ1BQ9UIG0 1483 aaKnown RBP31.47■■■□□ 2.63
XRRA1-208ENST00000528219 RSF1Q96T23 1441 aaPredicted RBP31.25■■■□□ 2.59
XRRA1-208ENST00000528219 WIZO95785 1651 aa31.24■■■□□ 2.59
XRRA1-208ENST00000528219 NESP48681 1621 aa31.02■■■□□ 2.56
XRRA1-208ENST00000528219 ERCC6Q03468 1493 aa30.95■■■□□ 2.55
XRRA1-208ENST00000528219 TOP2AP11388 1531 aaKnown RBP30.93■■■□□ 2.54
XRRA1-208ENST00000528219 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
XRRA1-208ENST00000528219 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
XRRA1-208ENST00000528219 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
XRRA1-208ENST00000528219 CUX2O14529 1486 aa30.67■■■□□ 2.5
XRRA1-208ENST00000528219 CFTRP13569 1480 aa30.63■■■□□ 2.49
XRRA1-208ENST00000528219 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
XRRA1-208ENST00000528219 KIF21AQ7Z4S6 1674 aa30.56■■■□□ 2.48
XRRA1-208ENST00000528219 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
XRRA1-208ENST00000528219 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
XRRA1-208ENST00000528219 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
XRRA1-208ENST00000528219 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
XRRA1-208ENST00000528219 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
XRRA1-208ENST00000528219 WDR62O43379 1518 aa30.3■■■□□ 2.44
XRRA1-208ENST00000528219 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
XRRA1-208ENST00000528219 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
XRRA1-208ENST00000528219 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
XRRA1-208ENST00000528219 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
XRRA1-208ENST00000528219 DNAJC5Q9H3Z4 198 aa29.94■■■□□ 2.38
XRRA1-208ENST00000528219 DNMBPQ6XZF7 1577 aa29.89■■■□□ 2.38
XRRA1-208ENST00000528219 IFT140Q96RY7 1462 aa29.82■■■□□ 2.36
XRRA1-208ENST00000528219 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.35
XRRA1-208ENST00000528219 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
XRRA1-208ENST00000528219 CUX1P39880 1505 aa29.68■■■□□ 2.34
XRRA1-208ENST00000528219 SOGA1O94964 1423 aa29.61■■■□□ 2.33
XRRA1-208ENST00000528219 TARBP1Q13395 1621 aaKnown RBP29.6■■■□□ 2.33
XRRA1-208ENST00000528219 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
XRRA1-208ENST00000528219 RAD54L2Q9Y4B4 1467 aa29.58■■■□□ 2.33
XRRA1-208ENST00000528219 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.31
XRRA1-208ENST00000528219 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
XRRA1-208ENST00000528219 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
XRRA1-208ENST00000528219 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
XRRA1-208ENST00000528219 OSCARQ8IYS5 282 aa29.43■■■□□ 2.3
XRRA1-208ENST00000528219 WDR97A6NE52 1622 aa29.38■■■□□ 2.29
XRRA1-208ENST00000528219 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
XRRA1-208ENST00000528219 SYNJ1O43426 1573 aa29.35■■■□□ 2.29
XRRA1-208ENST00000528219 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
XRRA1-208ENST00000528219 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
XRRA1-208ENST00000528219 GRIN2BQ13224 1484 aa29.26■■■□□ 2.27
XRRA1-208ENST00000528219 GAPVD1Q14C86 1478 aa29.24■■■□□ 2.27
XRRA1-208ENST00000528219 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
XRRA1-208ENST00000528219 FBLN2P98095 1184 aa29.21■■■□□ 2.27
XRRA1-208ENST00000528219 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
XRRA1-208ENST00000528219 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
XRRA1-208ENST00000528219 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
XRRA1-208ENST00000528219 CHD1O14646 1710 aa29.11■■■□□ 2.25
XRRA1-208ENST00000528219 SYNJ2O15056 1496 aa29.08■■■□□ 2.25
XRRA1-208ENST00000528219 PBRM1Q86U86 1689 aa29.08■■■□□ 2.25
XRRA1-208ENST00000528219 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
XRRA1-208ENST00000528219 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
XRRA1-208ENST00000528219 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
XRRA1-208ENST00000528219 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
XRRA1-208ENST00000528219 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
XRRA1-208ENST00000528219 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
XRRA1-208ENST00000528219 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
XRRA1-208ENST00000528219 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
XRRA1-208ENST00000528219 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
XRRA1-208ENST00000528219 CLASP1Q7Z460 1538 aa28.87■■■□□ 2.21
XRRA1-208ENST00000528219 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
XRRA1-208ENST00000528219 IGF1RP08069 1367 aa28.79■■■□□ 2.2
XRRA1-208ENST00000528219 NUP160Q12769 1436 aa28.77■■■□□ 2.2
XRRA1-208ENST00000528219 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
XRRA1-208ENST00000528219 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
XRRA1-208ENST00000528219 ARAP1Q96P48 1450 aa28.66■■■□□ 2.18
XRRA1-208ENST00000528219 CUL7Q14999 1698 aa28.63■■■□□ 2.17
XRRA1-208ENST00000528219 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
XRRA1-208ENST00000528219 RUSC2Q8N2Y8 1516 aa28.54■■■□□ 2.16
XRRA1-208ENST00000528219 JPH4Q96JJ6 628 aa28.51■■■□□ 2.15
XRRA1-208ENST00000528219 SHROOM2Q13796 1616 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms