RNA–Protein interactions for RNA: ENST00000527715.5

CTSH-204, Transcript of cathepsin H, humanhuman

TSL 1 (best)

Gene CTSH, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-204ENST00000527715 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.79□□□□□ -0.361e-13■■■■■ 65.4
CTSH-204ENST00000527715 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.87□□□□□ -0.994e-11■■■■■ 41.7
CTSH-204ENST00000527715 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.634e-12■■■■■ 41.1
CTSH-204ENST00000527715 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.339e-7■■■■■ 39.5
CTSH-204ENST00000527715 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.392e-10■■■■■ 37.1
CTSH-204ENST00000527715 LARP4Q71RC2 724 aaKnown RBP eCLIP11.75□□□□□ -0.535e-9■■■■■ 32.5
CTSH-204ENST00000527715 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■■■■ 32.4
CTSH-204ENST00000527715 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.182e-14■■■■□ 26.6
CTSH-204ENST00000527715 ZC3H11AO75152 810 aaKnown RBP eCLIP12.4□□□□□ -0.439e-7■■■■□ 23.7
CTSH-204ENST00000527715 HNRNPKP61978 463 aaKnown RBP eCLIP10.63□□□□□ -0.718e-7■■■■□ 22.5
CTSH-204ENST00000527715 YBX3P16989 372 aaKnown RBP eCLIP13.31□□□□□ -0.282e-6■■■■□ 21.3
CTSH-204ENST00000527715 PCBP1Q15365 356 aaKnown RBP eCLIP11.86□□□□□ -0.511e-10■■■■□ 21.2
CTSH-204ENST00000527715 SF3B4Q15427 424 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■■■□ 19.4
CTSH-204ENST00000527715 AKAP1Q92667 903 aaKnown RBP eCLIP10.96□□□□□ -0.655e-8■■■□□ 19.1
CTSH-204ENST00000527715 RPS3P23396 243 aaKnown RBP eCLIP11.41□□□□□ -0.589e-7■■■□□ 18.8
CTSH-204ENST00000527715 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.377e-8■■■□□ 17.2
CTSH-204ENST00000527715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.375e-14■■■□□ 15.6
CTSH-204ENST00000527715 PPIGQ13427 754 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■□□□ 12.8
CTSH-204ENST00000527715 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.854e-7■□□□□ 8.4
Retrieved 19 of 19 RNA–protein pairs in 7.5 ms