RNA–Protein interactions for RNA: ENST00000527623.1

PPP5C-213, Transcript of protein phosphatase 5 catalytic subunit, humanhuman

TSL 2

Gene PPP5C, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP5C-213ENST00000527623 NISCHQ9Y2I1 1504 aa50.36■■■■■ 5.65
PPP5C-213ENST00000527623 CCDC180Q9P1Z9 1646 aa44.78■■■■■ 4.76
PPP5C-213ENST00000527623 ABCC9O60706 1549 aa43.7■■■■■ 4.59
PPP5C-213ENST00000527623 DCAF8L2P0C7V8 631 aa42.14■■■■■ 4.34
PPP5C-213ENST00000527623 RB1CC1Q8TDY2 1594 aa42.12■■■■■ 4.33
PPP5C-213ENST00000527623 NACADO15069 1562 aa42.07■■■■■ 4.33
PPP5C-213ENST00000527623 ZCCHC6Q5VYS8 1495 aaKnown RBP41.95■■■■■ 4.31
PPP5C-213ENST00000527623 MYO15BQ96JP2 1530 aa41.82■■■■■ 4.29
PPP5C-213ENST00000527623 DCAF1Q9Y4B6 1507 aa41.68■■■■■ 4.26
PPP5C-213ENST00000527623 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.18
PPP5C-213ENST00000527623 PABPN1Q86U42 306 aaKnown RBP eCLIP40.85■■■■■ 4.133e-11■■■■□ 22.2
PPP5C-213ENST00000527623 SCRIBQ14160 1630 aa40.84■■■■■ 4.13
PPP5C-213ENST00000527623 BICRAQ9NZM4 1560 aa40.76■■■■■ 4.12
PPP5C-213ENST00000527623 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
PPP5C-213ENST00000527623 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
PPP5C-213ENST00000527623 EIF4G1Q04637 1599 aaKnown RBP39.72■■■■□ 3.95
PPP5C-213ENST00000527623 CC2D2AQ9P2K1 1620 aa39.54■■■■□ 3.92
PPP5C-213ENST00000527623 CECR2Q9BXF3 1484 aa39.26■■■■□ 3.88
PPP5C-213ENST00000527623 SMARCA4P51532 1647 aa39.07■■■■□ 3.85
PPP5C-213ENST00000527623 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
PPP5C-213ENST00000527623 SMARCA2P51531 1590 aa38.82■■■■□ 3.81
PPP5C-213ENST00000527623 ATAD2BQ9ULI0 1458 aa38.82■■■■□ 3.81
PPP5C-213ENST00000527623 NCAPD3P42695 1498 aa38.79■■■■□ 3.8
PPP5C-213ENST00000527623 MROH2BQ7Z745 1585 aa38.79■■■■□ 3.8
PPP5C-213ENST00000527623 PEG3Q9GZU2 1588 aa38.67■■■■□ 3.78
PPP5C-213ENST00000527623 HMGXB3Q12766 1538 aa38.62■■■■□ 3.77
PPP5C-213ENST00000527623 BAZ1BQ9UIG0 1483 aaKnown RBP38.54■■■■□ 3.76
PPP5C-213ENST00000527623 WIZO95785 1651 aa38.41■■■■□ 3.74
PPP5C-213ENST00000527623 RSF1Q96T23 1441 aaPredicted RBP38.38■■■■□ 3.74
PPP5C-213ENST00000527623 TOP2AP11388 1531 aaKnown RBP38.01■■■■□ 3.67
PPP5C-213ENST00000527623 NESP48681 1621 aa37.81■■■■□ 3.64
PPP5C-213ENST00000527623 LAMC3Q9Y6N6 1575 aa37.8■■■■□ 3.64
PPP5C-213ENST00000527623 ERCC6Q03468 1493 aa37.71■■■■□ 3.63
PPP5C-213ENST00000527623 CADPSQ9ULU8 1353 aa37.68■■■■□ 3.62
PPP5C-213ENST00000527623 PDS5BQ9NTI5 1447 aa37.55■■■■□ 3.6
PPP5C-213ENST00000527623 CCDC88BA6NC98 1476 aa37.55■■■■□ 3.6
PPP5C-213ENST00000527623 SUPT5HO00267 1087 aaKnown RBP37.54■■■■□ 3.6
PPP5C-213ENST00000527623 CFTRP13569 1480 aa37.45■■■■□ 3.59
PPP5C-213ENST00000527623 KIF21AQ7Z4S6 1674 aa37.42■■■■□ 3.58
PPP5C-213ENST00000527623 CUX2O14529 1486 aa37.26■■■■□ 3.55
PPP5C-213ENST00000527623 PRDM2Q13029 1718 aa37.25■■■■□ 3.55
PPP5C-213ENST00000527623 FANCD2Q9BXW9 1451 aa37.25■■■■□ 3.55
PPP5C-213ENST00000527623 THOC2Q8NI27 1593 aaKnown RBP37.24■■■■□ 3.55
PPP5C-213ENST00000527623 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
PPP5C-213ENST00000527623 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.54
PPP5C-213ENST00000527623 WDR62O43379 1518 aa37■■■■□ 3.51
PPP5C-213ENST00000527623 URB2Q14146 1524 aaKnown RBP36.84■■■■□ 3.49
PPP5C-213ENST00000527623 ABCC8Q09428 1581 aa36.72■■■■□ 3.47
PPP5C-213ENST00000527623 TOPBP1Q92547 1522 aa36.65■■■■□ 3.46
PPP5C-213ENST00000527623 DNMBPQ6XZF7 1577 aa36.64■■■■□ 3.46
PPP5C-213ENST00000527623 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
PPP5C-213ENST00000527623 CUX1P39880 1505 aa36.39■■■■□ 3.42
PPP5C-213ENST00000527623 POLA1P09884 1462 aaPredicted RBP36.34■■■■□ 3.41
PPP5C-213ENST00000527623 FGD5Q6ZNL6 1462 aa36.28■■■■□ 3.4
PPP5C-213ENST00000527623 TARBP1Q13395 1621 aaKnown RBP36.23■■■■□ 3.39
PPP5C-213ENST00000527623 SOGA1O94964 1423 aa36.23■■■■□ 3.39
PPP5C-213ENST00000527623 WRNQ14191 1432 aaPredicted RBP eCLIP36.23■■■■□ 3.39
PPP5C-213ENST00000527623 ZNF608Q9ULD9 1512 aaPredicted RBP36.2■■■■□ 3.39
PPP5C-213ENST00000527623 RAD54L2Q9Y4B4 1467 aa36.18■■■■□ 3.38
PPP5C-213ENST00000527623 BIVM-ERCC5R4GMW8 1640 aa36.14■■■■□ 3.38
PPP5C-213ENST00000527623 TOP2BQ02880 1626 aa36.13■■■■□ 3.37
PPP5C-213ENST00000527623 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
PPP5C-213ENST00000527623 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
PPP5C-213ENST00000527623 AQRO60306 1485 aaKnown RBP eCLIP36.04■■■■□ 3.361e-8■■■■□ 21.4
PPP5C-213ENST00000527623 WDR97A6NE52 1622 aa36.01■■■■□ 3.36
PPP5C-213ENST00000527623 DNAJC5Q9H3Z4 198 aa36■■■■□ 3.35
PPP5C-213ENST00000527623 TDRD9Q8NDG6 1382 aaKnown RBP35.99■■■■□ 3.35
PPP5C-213ENST00000527623 ABCA10Q8WWZ4 1543 aa35.93■■■■□ 3.34
PPP5C-213ENST00000527623 GAPVD1Q14C86 1478 aa35.81■■■■□ 3.32
PPP5C-213ENST00000527623 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
PPP5C-213ENST00000527623 ABCA5Q8WWZ7 1642 aa35.77■■■■□ 3.32
PPP5C-213ENST00000527623 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
PPP5C-213ENST00000527623 PBRM1Q86U86 1689 aa35.75■■■■□ 3.31
PPP5C-213ENST00000527623 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
PPP5C-213ENST00000527623 MAGI1Q96QZ7 1491 aaPredicted RBP35.68■■■■□ 3.3
PPP5C-213ENST00000527623 FBLN2P98095 1184 aa35.66■■■■□ 3.3
PPP5C-213ENST00000527623 CHD1O14646 1710 aa35.66■■■■□ 3.3
PPP5C-213ENST00000527623 CHMP7Q8WUX9 453 aaPredicted RBP35.58■■■■□ 3.29
PPP5C-213ENST00000527623 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
PPP5C-213ENST00000527623 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
PPP5C-213ENST00000527623 KIF27Q86VH2 1401 aa35.49■■■■□ 3.27
PPP5C-213ENST00000527623 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
PPP5C-213ENST00000527623 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
PPP5C-213ENST00000527623 FHAD1B1AJZ9 1412 aa35.4■■■■□ 3.26
PPP5C-213ENST00000527623 GRIN2AQ12879 1464 aa35.32■■■■□ 3.24
PPP5C-213ENST00000527623 IGF1RP08069 1367 aa35.28■■■■□ 3.24
PPP5C-213ENST00000527623 CUL7Q14999 1698 aa35.24■■■■□ 3.23
PPP5C-213ENST00000527623 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
PPP5C-213ENST00000527623 NUP160Q12769 1436 aa35.14■■■■□ 3.22
PPP5C-213ENST00000527623 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
PPP5C-213ENST00000527623 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
PPP5C-213ENST00000527623 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
PPP5C-213ENST00000527623 ARHGEF11O15085 1522 aa35.13■■■■□ 3.21
PPP5C-213ENST00000527623 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
PPP5C-213ENST00000527623 CEP170Q5SW79 1584 aa35.12■■■■□ 3.21
PPP5C-213ENST00000527623 CARMIL1Q5VZK9 1371 aa35.12■■■■□ 3.21
PPP5C-213ENST00000527623 CHIC1Q5VXU3 224 aa35.05■■■■□ 3.2
PPP5C-213ENST00000527623 RAPGEF2Q9Y4G8 1499 aa34.92■■■■□ 3.18
PPP5C-213ENST00000527623 EEA1Q15075 1411 aa34.88■■■■□ 3.17
PPP5C-213ENST00000527623 SHROOM2Q13796 1616 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms