RNA–Protein interactions for RNA: ENST00000527479.5

PTDSS2-207, Transcript of phosphatidylserine synthase 2, humanhuman

TSL 5

Gene PTDSS2, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-207ENST00000527479 NISCHQ9Y2I1 1504 aa51.27■■■■■ 5.8
PTDSS2-207ENST00000527479 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
PTDSS2-207ENST00000527479 ABCC9O60706 1549 aa45.44■■■■■ 4.86
PTDSS2-207ENST00000527479 RB1CC1Q8TDY2 1594 aa43.37■■■■■ 4.53
PTDSS2-207ENST00000527479 NACADO15069 1562 aa43.19■■■■■ 4.5
PTDSS2-207ENST00000527479 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
PTDSS2-207ENST00000527479 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
PTDSS2-207ENST00000527479 ZCCHC6Q5VYS8 1495 aaKnown RBP42.56■■■■■ 4.4
PTDSS2-207ENST00000527479 PABPN1Q86U42 306 aaKnown RBP eCLIP42.42■■■■■ 4.38
PTDSS2-207ENST00000527479 UNC13AQ9UPW8 1703 aa42.4■■■■■ 4.38
PTDSS2-207ENST00000527479 DNAJC5BQ9UF47 199 aa42.36■■■■■ 4.37
PTDSS2-207ENST00000527479 DCAF1Q9Y4B6 1507 aa42.35■■■■■ 4.37
PTDSS2-207ENST00000527479 BICRAQ9NZM4 1560 aa42.16■■■■■ 4.34
PTDSS2-207ENST00000527479 SCRIBQ14160 1630 aa41.76■■■■■ 4.28
PTDSS2-207ENST00000527479 SHROOM4Q9ULL8 1493 aa41.54■■■■■ 4.24
PTDSS2-207ENST00000527479 EIF4G1Q04637 1599 aaKnown RBP41.06■■■■■ 4.16
PTDSS2-207ENST00000527479 CC2D2AQ9P2K1 1620 aa41.04■■■■■ 4.16
PTDSS2-207ENST00000527479 CECR2Q9BXF3 1484 aa40.88■■■■■ 4.13
PTDSS2-207ENST00000527479 NCAPD3P42695 1498 aa39.91■■■■□ 3.98
PTDSS2-207ENST00000527479 SMARCA4P51532 1647 aa39.87■■■■□ 3.97
PTDSS2-207ENST00000527479 ATAD2BQ9ULI0 1458 aa39.85■■■■□ 3.97
PTDSS2-207ENST00000527479 BAZ1AQ9NRL2 1556 aaPredicted RBP39.73■■■■□ 3.95
PTDSS2-207ENST00000527479 SMARCA2P51531 1590 aa39.71■■■■□ 3.95
PTDSS2-207ENST00000527479 HMGXB3Q12766 1538 aa39.6■■■■□ 3.93
PTDSS2-207ENST00000527479 MROH2BQ7Z745 1585 aa39.53■■■■□ 3.92
PTDSS2-207ENST00000527479 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
PTDSS2-207ENST00000527479 BAZ1BQ9UIG0 1483 aaKnown RBP39.45■■■■□ 3.91
PTDSS2-207ENST00000527479 NESP48681 1621 aa39.18■■■■□ 3.86
PTDSS2-207ENST00000527479 ERCC6Q03468 1493 aa39.15■■■■□ 3.86
PTDSS2-207ENST00000527479 WIZO95785 1651 aa39.05■■■■□ 3.84
PTDSS2-207ENST00000527479 CUX2O14529 1486 aa38.94■■■■□ 3.82
PTDSS2-207ENST00000527479 LAMC3Q9Y6N6 1575 aa38.89■■■■□ 3.82
PTDSS2-207ENST00000527479 RSF1Q96T23 1441 aaPredicted RBP38.88■■■■□ 3.81
PTDSS2-207ENST00000527479 CADPSQ9ULU8 1353 aa38.72■■■■□ 3.79
PTDSS2-207ENST00000527479 PDS5BQ9NTI5 1447 aa38.67■■■■□ 3.78
PTDSS2-207ENST00000527479 THOC2Q8NI27 1593 aaKnown RBP38.64■■■■□ 3.78
PTDSS2-207ENST00000527479 KIF21AQ7Z4S6 1674 aa38.62■■■■□ 3.77
PTDSS2-207ENST00000527479 TOP2AP11388 1531 aaKnown RBP38.57■■■■□ 3.76
PTDSS2-207ENST00000527479 DNAJC5Q9H3Z4 198 aa38.54■■■■□ 3.76
PTDSS2-207ENST00000527479 CFTRP13569 1480 aa38.36■■■■□ 3.73
PTDSS2-207ENST00000527479 MRC2Q9UBG0 1479 aa38.32■■■■□ 3.72
PTDSS2-207ENST00000527479 FANCD2Q9BXW9 1451 aa38.26■■■■□ 3.72
PTDSS2-207ENST00000527479 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
PTDSS2-207ENST00000527479 WDR62O43379 1518 aa38.21■■■■□ 3.71
PTDSS2-207ENST00000527479 CCDC88BA6NC98 1476 aa38.18■■■■□ 3.7
PTDSS2-207ENST00000527479 URB2Q14146 1524 aaKnown RBP37.94■■■■□ 3.66
PTDSS2-207ENST00000527479 PRDM2Q13029 1718 aa37.91■■■■□ 3.66
PTDSS2-207ENST00000527479 TOPBP1Q92547 1522 aa37.59■■■■□ 3.61
PTDSS2-207ENST00000527479 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
PTDSS2-207ENST00000527479 SUPT5HO00267 1087 aaKnown RBP37.48■■■■□ 3.59
PTDSS2-207ENST00000527479 IFT140Q96RY7 1462 aa37.47■■■■□ 3.59
PTDSS2-207ENST00000527479 DNMBPQ6XZF7 1577 aa37.46■■■■□ 3.59
PTDSS2-207ENST00000527479 ZNF608Q9ULD9 1512 aaPredicted RBP37.41■■■■□ 3.58
PTDSS2-207ENST00000527479 OSCARQ8IYS5 282 aa37.29■■■■□ 3.56
PTDSS2-207ENST00000527479 POLA1P09884 1462 aaPredicted RBP37.24■■■■□ 3.55
PTDSS2-207ENST00000527479 TARBP1Q13395 1621 aaKnown RBP37.22■■■■□ 3.55
PTDSS2-207ENST00000527479 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
PTDSS2-207ENST00000527479 AQRO60306 1485 aaKnown RBP eCLIP37.14■■■■□ 3.54
PTDSS2-207ENST00000527479 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
PTDSS2-207ENST00000527479 CUX1P39880 1505 aa37.1■■■■□ 3.53
PTDSS2-207ENST00000527479 SOGA1O94964 1423 aa37.09■■■■□ 3.53
PTDSS2-207ENST00000527479 FGD5Q6ZNL6 1462 aa37.06■■■■□ 3.52
PTDSS2-207ENST00000527479 TRIM41Q8WV44 630 aa37.01■■■■□ 3.52
PTDSS2-207ENST00000527479 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
PTDSS2-207ENST00000527479 CHD1O14646 1710 aa36.81■■■■□ 3.48
PTDSS2-207ENST00000527479 FBLN2P98095 1184 aa36.8■■■■□ 3.48
PTDSS2-207ENST00000527479 WDR97A6NE52 1622 aa36.8■■■■□ 3.48
PTDSS2-207ENST00000527479 SNAPC4Q5SXM2 1469 aa36.73■■■■□ 3.47
PTDSS2-207ENST00000527479 RIMBP3CA6NJZ7 1639 aa36.73■■■■□ 3.47
PTDSS2-207ENST00000527479 RIMBP3BA6NNM3 1639 aa36.73■■■■□ 3.47
PTDSS2-207ENST00000527479 RIMBP3Q9UFD9 1639 aa36.73■■■■□ 3.47
PTDSS2-207ENST00000527479 GRIN2BQ13224 1484 aa36.69■■■■□ 3.46
PTDSS2-207ENST00000527479 ARHGEF11O15085 1522 aa36.66■■■■□ 3.46
PTDSS2-207ENST00000527479 ABCA10Q8WWZ4 1543 aa36.65■■■■□ 3.46
PTDSS2-207ENST00000527479 WRNQ14191 1432 aaPredicted RBP eCLIP36.63■■■■□ 3.45
PTDSS2-207ENST00000527479 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
PTDSS2-207ENST00000527479 MAGI1Q96QZ7 1491 aaPredicted RBP36.62■■■■□ 3.45
PTDSS2-207ENST00000527479 CHMP7Q8WUX9 453 aaPredicted RBP36.59■■■■□ 3.45
PTDSS2-207ENST00000527479 TOP2BQ02880 1626 aa36.59■■■■□ 3.45
PTDSS2-207ENST00000527479 BIVM-ERCC5R4GMW8 1640 aa36.58■■■■□ 3.45
PTDSS2-207ENST00000527479 SYNJ1O43426 1573 aa36.57■■■■□ 3.45
PTDSS2-207ENST00000527479 ABCA5Q8WWZ7 1642 aa36.55■■■■□ 3.44
PTDSS2-207ENST00000527479 PBRM1Q86U86 1689 aa36.53■■■■□ 3.44
PTDSS2-207ENST00000527479 SYNJ2O15056 1496 aa36.51■■■■□ 3.44
PTDSS2-207ENST00000527479 CLASP1Q7Z460 1538 aa36.43■■■■□ 3.42
PTDSS2-207ENST00000527479 CYB5RLQ6IPT4 315 aa36.42■■■■□ 3.42
PTDSS2-207ENST00000527479 ARAP1Q96P48 1450 aa36.34■■■■□ 3.41
PTDSS2-207ENST00000527479 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
PTDSS2-207ENST00000527479 GRIN2AQ12879 1464 aa36.23■■■■□ 3.39
PTDSS2-207ENST00000527479 ERICH3Q5RHP9 1530 aa36.18■■■■□ 3.38
PTDSS2-207ENST00000527479 FHAD1B1AJZ9 1412 aa36.17■■■■□ 3.38
PTDSS2-207ENST00000527479 NUP160Q12769 1436 aa36.09■■■■□ 3.37
PTDSS2-207ENST00000527479 CEP170Q5SW79 1584 aa36.08■■■■□ 3.37
PTDSS2-207ENST00000527479 ERCC6L2Q5T890 1561 aa35.93■■■■□ 3.34
PTDSS2-207ENST00000527479 KIF27Q86VH2 1401 aa35.9■■■■□ 3.34
PTDSS2-207ENST00000527479 IGF1RP08069 1367 aa35.89■■■■□ 3.34
PTDSS2-207ENST00000527479 SHROOM2Q13796 1616 aa35.86■■■■□ 3.33
PTDSS2-207ENST00000527479 TRHP20396 242 aaPredicted RBP35.85■■■■□ 3.33
PTDSS2-207ENST00000527479 JPH4Q96JJ6 628 aa35.76■■■■□ 3.32
PTDSS2-207ENST00000527479 PRG4Q92954 1404 aaPredicted RBP35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms