RNA–Protein interactions for RNA: ENST00000527009.5

SCYL1-208, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 5 BASIC

Gene SCYL1, Length 2,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-208ENST00000527009 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
SCYL1-208ENST00000527009 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.1
SCYL1-208ENST00000527009 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
SCYL1-208ENST00000527009 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
SCYL1-208ENST00000527009 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
SCYL1-208ENST00000527009 ABCC9O60706 1549 aa26.98■■□□□ 1.91
SCYL1-208ENST00000527009 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
SCYL1-208ENST00000527009 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
SCYL1-208ENST00000527009 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
SCYL1-208ENST00000527009 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SCYL1-208ENST00000527009 NACADO15069 1562 aa26.23■■□□□ 1.79
SCYL1-208ENST00000527009 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
SCYL1-208ENST00000527009 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
SCYL1-208ENST00000527009 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
SCYL1-208ENST00000527009 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
SCYL1-208ENST00000527009 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
SCYL1-208ENST00000527009 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
SCYL1-208ENST00000527009 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
SCYL1-208ENST00000527009 WIZO95785 1651 aa25.53■■□□□ 1.68
SCYL1-208ENST00000527009 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
SCYL1-208ENST00000527009 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
SCYL1-208ENST00000527009 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
SCYL1-208ENST00000527009 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
SCYL1-208ENST00000527009 TRIM41Q8WV44 630 aa25■■□□□ 1.59
SCYL1-208ENST00000527009 FAM9AQ8IZU1 332 aaPredicted RBP25■■□□□ 1.59
SCYL1-208ENST00000527009 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
SCYL1-208ENST00000527009 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
SCYL1-208ENST00000527009 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
SCYL1-208ENST00000527009 SMARCA2P51531 1590 aa24.89■■□□□ 1.57
SCYL1-208ENST00000527009 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
SCYL1-208ENST00000527009 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
SCYL1-208ENST00000527009 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
SCYL1-208ENST00000527009 PEG3Q9GZU2 1588 aa24.68■■□□□ 1.54
SCYL1-208ENST00000527009 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
SCYL1-208ENST00000527009 SOGA1O94964 1423 aa24.38■■□□□ 1.49
SCYL1-208ENST00000527009 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
SCYL1-208ENST00000527009 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
SCYL1-208ENST00000527009 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
SCYL1-208ENST00000527009 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
SCYL1-208ENST00000527009 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
SCYL1-208ENST00000527009 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
SCYL1-208ENST00000527009 CC2D2AQ9P2K1 1620 aa24.21■■□□□ 1.47
SCYL1-208ENST00000527009 PPARGC1BQ86YN6 1023 aaKnown RBP24.17■■□□□ 1.46
SCYL1-208ENST00000527009 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
SCYL1-208ENST00000527009 CSRNP3Q8WYN3 585 aa24.03■■□□□ 1.44
SCYL1-208ENST00000527009 CFTRP13569 1480 aa23.97■■□□□ 1.43
SCYL1-208ENST00000527009 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.42
SCYL1-208ENST00000527009 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
SCYL1-208ENST00000527009 CUX1P39880 1505 aa23.93■■□□□ 1.42
SCYL1-208ENST00000527009 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
SCYL1-208ENST00000527009 RANGAP1P46060 587 aaPredicted RBP23.9■■□□□ 1.42
SCYL1-208ENST00000527009 NESP48681 1621 aa23.88■■□□□ 1.41
SCYL1-208ENST00000527009 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
SCYL1-208ENST00000527009 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
SCYL1-208ENST00000527009 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
SCYL1-208ENST00000527009 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
SCYL1-208ENST00000527009 EEA1Q15075 1411 aa23.8■■□□□ 1.4
SCYL1-208ENST00000527009 HRCP23327 699 aa23.78■■□□□ 1.4
SCYL1-208ENST00000527009 RAPGEF2Q9Y4G8 1499 aa23.78■■□□□ 1.4
SCYL1-208ENST00000527009 GOLGA3Q08378 1498 aa23.76■■□□□ 1.39
SCYL1-208ENST00000527009 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
SCYL1-208ENST00000527009 PRDM2Q13029 1718 aa23.69■■□□□ 1.38
SCYL1-208ENST00000527009 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
SCYL1-208ENST00000527009 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
SCYL1-208ENST00000527009 KIF21BO75037 1637 aa23.64■■□□□ 1.37
SCYL1-208ENST00000527009 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
SCYL1-208ENST00000527009 CUX2O14529 1486 aa23.56■■□□□ 1.36
SCYL1-208ENST00000527009 RAD54L2Q9Y4B4 1467 aa23.53■■□□□ 1.36
SCYL1-208ENST00000527009 CLIP1P30622 1438 aa23.52■■□□□ 1.36
SCYL1-208ENST00000527009 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
SCYL1-208ENST00000527009 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
SCYL1-208ENST00000527009 TOPBP1Q92547 1522 aa23.44■■□□□ 1.34
SCYL1-208ENST00000527009 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
SCYL1-208ENST00000527009 IGF1RP08069 1367 aa23.41■■□□□ 1.34
SCYL1-208ENST00000527009 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
SCYL1-208ENST00000527009 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
SCYL1-208ENST00000527009 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
SCYL1-208ENST00000527009 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
SCYL1-208ENST00000527009 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
SCYL1-208ENST00000527009 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SCYL1-208ENST00000527009 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
SCYL1-208ENST00000527009 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
SCYL1-208ENST00000527009 TDRD9Q8NDG6 1382 aaKnown RBP23.28■■□□□ 1.32
SCYL1-208ENST00000527009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
SCYL1-208ENST00000527009 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
SCYL1-208ENST00000527009 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
SCYL1-208ENST00000527009 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.31
SCYL1-208ENST00000527009 ARHGAP35Q9NRY4 1499 aa23.18■■□□□ 1.3
SCYL1-208ENST00000527009 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
SCYL1-208ENST00000527009 APLP2Q06481 763 aa23.11■■□□□ 1.29
SCYL1-208ENST00000527009 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
SCYL1-208ENST00000527009 WDR97A6NE52 1622 aa23.1■■□□□ 1.29
SCYL1-208ENST00000527009 AQRO60306 1485 aaKnown RBP eCLIP23.04■■□□□ 1.281e-7■■■■■ 35.6
SCYL1-208ENST00000527009 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
SCYL1-208ENST00000527009 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
SCYL1-208ENST00000527009 ABCA5Q8WWZ7 1642 aa23.01■■□□□ 1.27
SCYL1-208ENST00000527009 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
SCYL1-208ENST00000527009 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
SCYL1-208ENST00000527009 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
SCYL1-208ENST00000527009 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 292.7 ms