RNA–Protein interactions for RNA: ENST00000526937.5

CHEK1-208, Transcript of checkpoint kinase 1, humanhuman

TSL 4

Gene CHEK1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-208ENST00000526937 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
CHEK1-208ENST00000526937 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
CHEK1-208ENST00000526937 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
CHEK1-208ENST00000526937 PHF23Q9BUL5 403 aaPredicted RBP23.39■■□□□ 1.33
CHEK1-208ENST00000526937 FOXD1Q16676 465 aa22.21■■□□□ 1.15
CHEK1-208ENST00000526937 POTEDQ86YR6 584 aa21.35■■□□□ 1.01
CHEK1-208ENST00000526937 MSH5O43196 834 aa21.02■□□□□ 0.96
CHEK1-208ENST00000526937 PIAS4Q8N2W9 510 aaPredicted RBP20.67■□□□□ 0.9
CHEK1-208ENST00000526937 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
CHEK1-208ENST00000526937 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
CHEK1-208ENST00000526937 ADRA2BP18089 450 aa20.28■□□□□ 0.84
CHEK1-208ENST00000526937 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
CHEK1-208ENST00000526937 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
CHEK1-208ENST00000526937 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
CHEK1-208ENST00000526937 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
CHEK1-208ENST00000526937 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
CHEK1-208ENST00000526937 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
CHEK1-208ENST00000526937 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
CHEK1-208ENST00000526937 RNF39Q9H2S5 420 aa17.86■□□□□ 0.45
CHEK1-208ENST00000526937 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
CHEK1-208ENST00000526937 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
CHEK1-208ENST00000526937 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
CHEK1-208ENST00000526937 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
CHEK1-208ENST00000526937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHEK1-208ENST00000526937 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
CHEK1-208ENST00000526937 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
CHEK1-208ENST00000526937 POTEHQ6S545 545 aa16.64■□□□□ 0.25
CHEK1-208ENST00000526937 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
CHEK1-208ENST00000526937 CAPN15O75808 1086 aa16.56■□□□□ 0.24
CHEK1-208ENST00000526937 DSG3P32926 999 aa16.55■□□□□ 0.24
CHEK1-208ENST00000526937 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
CHEK1-208ENST00000526937 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
CHEK1-208ENST00000526937 APLP2Q06481 763 aa16.15■□□□□ 0.18
CHEK1-208ENST00000526937 ABCB7O75027 752 aa16.14■□□□□ 0.17
CHEK1-208ENST00000526937 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
CHEK1-208ENST00000526937 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
CHEK1-208ENST00000526937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
CHEK1-208ENST00000526937 KCNA4P22459 653 aa16.01■□□□□ 0.15
CHEK1-208ENST00000526937 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
CHEK1-208ENST00000526937 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
CHEK1-208ENST00000526937 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
CHEK1-208ENST00000526937 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
CHEK1-208ENST00000526937 POLA2Q14181 598 aa15.6■□□□□ 0.09
CHEK1-208ENST00000526937 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
CHEK1-208ENST00000526937 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
CHEK1-208ENST00000526937 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
CHEK1-208ENST00000526937 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
CHEK1-208ENST00000526937 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
CHEK1-208ENST00000526937 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
CHEK1-208ENST00000526937 PIP4P2Q8N4L2 257 aa15.19■□□□□ 0.02
CHEK1-208ENST00000526937 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
CHEK1-208ENST00000526937 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
CHEK1-208ENST00000526937 PITPNM1O00562 1244 aa15.07■□□□□ 0
CHEK1-208ENST00000526937 HAX1O00165 279 aa15.06■□□□□ 0
CHEK1-208ENST00000526937 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
CHEK1-208ENST00000526937 FXR2P51116 673 aaKnown RBP eCLIP15.01□□□□□ -0.01
CHEK1-208ENST00000526937 NISCHQ9Y2I1 1504 aa14.84□□□□□ -0.03
CHEK1-208ENST00000526937 EVX2Q03828 476 aa14.79□□□□□ -0.04
CHEK1-208ENST00000526937 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
CHEK1-208ENST00000526937 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
CHEK1-208ENST00000526937 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
CHEK1-208ENST00000526937 ZBTB22O15209 634 aa14.71□□□□□ -0.05
CHEK1-208ENST00000526937 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
CHEK1-208ENST00000526937 FBLN2P98095 1184 aa14.69□□□□□ -0.06
CHEK1-208ENST00000526937 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
CHEK1-208ENST00000526937 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
CHEK1-208ENST00000526937 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
CHEK1-208ENST00000526937 C19orf67A6NJJ6 358 aa14.55□□□□□ -0.08
CHEK1-208ENST00000526937 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
CHEK1-208ENST00000526937 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
CHEK1-208ENST00000526937 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
CHEK1-208ENST00000526937 GABBR2O75899 941 aa14.46□□□□□ -0.09
CHEK1-208ENST00000526937 LHX8Q68G74 356 aa14.4□□□□□ -0.1
CHEK1-208ENST00000526937 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
CHEK1-208ENST00000526937 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
CHEK1-208ENST00000526937 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHEK1-208ENST00000526937 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
CHEK1-208ENST00000526937 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
CHEK1-208ENST00000526937 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
CHEK1-208ENST00000526937 CLCN6P51797 869 aa14.07□□□□□ -0.16
CHEK1-208ENST00000526937 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
CHEK1-208ENST00000526937 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
CHEK1-208ENST00000526937 ZNF579Q8NAF0 562 aaKnown RBP13.93□□□□□ -0.18
CHEK1-208ENST00000526937 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
CHEK1-208ENST00000526937 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
CHEK1-208ENST00000526937 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
CHEK1-208ENST00000526937 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
CHEK1-208ENST00000526937 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
CHEK1-208ENST00000526937 STAG3Q9UJ98 1225 aa13.77□□□□□ -0.21
CHEK1-208ENST00000526937 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
CHEK1-208ENST00000526937 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
CHEK1-208ENST00000526937 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
CHEK1-208ENST00000526937 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
CHEK1-208ENST00000526937 POTEMA6NI47 508 aa13.59□□□□□ -0.23
CHEK1-208ENST00000526937 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
CHEK1-208ENST00000526937 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHEK1-208ENST00000526937 ABCC9O60706 1549 aa13.57□□□□□ -0.24
CHEK1-208ENST00000526937 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
CHEK1-208ENST00000526937 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
CHEK1-208ENST00000526937 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms