RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
LTBP3-206ENST00000526825 ABCC9O60706 1549 aa33.87■■■■□ 3.01
LTBP3-206ENST00000526825 CCDC180Q9P1Z9 1646 aa33.74■■■□□ 2.99
LTBP3-206ENST00000526825 RB1CC1Q8TDY2 1594 aa32.17■■■□□ 2.74
LTBP3-206ENST00000526825 NACADO15069 1562 aa31.98■■■□□ 2.71
LTBP3-206ENST00000526825 DNAJC5BQ9UF47 199 aa31.95■■■□□ 2.71
LTBP3-206ENST00000526825 DCAF8L2P0C7V8 631 aa31.91■■■□□ 2.7
LTBP3-206ENST00000526825 PABPN1Q86U42 306 aaKnown RBP eCLIP31.61■■■□□ 2.65
LTBP3-206ENST00000526825 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
LTBP3-206ENST00000526825 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
LTBP3-206ENST00000526825 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
LTBP3-206ENST00000526825 ZCCHC6Q5VYS8 1495 aaKnown RBP31.21■■■□□ 2.59
LTBP3-206ENST00000526825 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.58
LTBP3-206ENST00000526825 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.52
LTBP3-206ENST00000526825 SCRIBQ14160 1630 aa30.75■■■□□ 2.51
LTBP3-206ENST00000526825 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
LTBP3-206ENST00000526825 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
LTBP3-206ENST00000526825 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
LTBP3-206ENST00000526825 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
LTBP3-206ENST00000526825 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
LTBP3-206ENST00000526825 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
LTBP3-206ENST00000526825 DNAJC5Q9H3Z4 198 aa29.33■■■□□ 2.29
LTBP3-206ENST00000526825 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
LTBP3-206ENST00000526825 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
LTBP3-206ENST00000526825 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
LTBP3-206ENST00000526825 ERCC6Q03468 1493 aa29.2■■■□□ 2.26
LTBP3-206ENST00000526825 CUX2O14529 1486 aa29.18■■■□□ 2.26
LTBP3-206ENST00000526825 BAZ1BQ9UIG0 1483 aaKnown RBP29.13■■■□□ 2.25
LTBP3-206ENST00000526825 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
LTBP3-206ENST00000526825 NESP48681 1621 aa29.1■■■□□ 2.25
LTBP3-206ENST00000526825 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
LTBP3-206ENST00000526825 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
LTBP3-206ENST00000526825 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
LTBP3-206ENST00000526825 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
LTBP3-206ENST00000526825 CADPSQ9ULU8 1353 aa28.7■■■□□ 2.18
LTBP3-206ENST00000526825 WIZO95785 1651 aa28.66■■■□□ 2.18
LTBP3-206ENST00000526825 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
LTBP3-206ENST00000526825 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
LTBP3-206ENST00000526825 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
LTBP3-206ENST00000526825 WDR62O43379 1518 aa28.36■■■□□ 2.13
LTBP3-206ENST00000526825 CFTRP13569 1480 aa28.34■■■□□ 2.13
LTBP3-206ENST00000526825 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
LTBP3-206ENST00000526825 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
LTBP3-206ENST00000526825 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
LTBP3-206ENST00000526825 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
LTBP3-206ENST00000526825 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
LTBP3-206ENST00000526825 OSCARQ8IYS5 282 aa27.95■■■□□ 2.06
LTBP3-206ENST00000526825 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
LTBP3-206ENST00000526825 PRDM2Q13029 1718 aa27.88■■■□□ 2.05
LTBP3-206ENST00000526825 IFT140Q96RY7 1462 aa27.78■■■□□ 2.04
LTBP3-206ENST00000526825 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
LTBP3-206ENST00000526825 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
LTBP3-206ENST00000526825 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
LTBP3-206ENST00000526825 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
LTBP3-206ENST00000526825 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 26e-8■■■■■ 31.2
LTBP3-206ENST00000526825 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
LTBP3-206ENST00000526825 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
LTBP3-206ENST00000526825 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
LTBP3-206ENST00000526825 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
LTBP3-206ENST00000526825 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
LTBP3-206ENST00000526825 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
LTBP3-206ENST00000526825 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
LTBP3-206ENST00000526825 SOGA1O94964 1423 aa27.41■■□□□ 1.98
LTBP3-206ENST00000526825 ARHGEF11O15085 1522 aa27.4■■□□□ 1.98
LTBP3-206ENST00000526825 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
LTBP3-206ENST00000526825 FBLN2P98095 1184 aa27.35■■□□□ 1.97
LTBP3-206ENST00000526825 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
LTBP3-206ENST00000526825 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
LTBP3-206ENST00000526825 CHD1O14646 1710 aa27.3■■□□□ 1.96
LTBP3-206ENST00000526825 CUX1P39880 1505 aa27.28■■□□□ 1.96
LTBP3-206ENST00000526825 SUPT5HO00267 1087 aaKnown RBP27.21■■□□□ 1.95
LTBP3-206ENST00000526825 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
LTBP3-206ENST00000526825 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
LTBP3-206ENST00000526825 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
LTBP3-206ENST00000526825 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
LTBP3-206ENST00000526825 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
LTBP3-206ENST00000526825 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
LTBP3-206ENST00000526825 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
LTBP3-206ENST00000526825 SYNJ2O15056 1496 aa27.04■■□□□ 1.92
LTBP3-206ENST00000526825 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
LTBP3-206ENST00000526825 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
LTBP3-206ENST00000526825 SYNJ1O43426 1573 aa27■■□□□ 1.91
LTBP3-206ENST00000526825 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
LTBP3-206ENST00000526825 ABCA5Q8WWZ7 1642 aa26.91■■□□□ 1.9
LTBP3-206ENST00000526825 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
LTBP3-206ENST00000526825 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
LTBP3-206ENST00000526825 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
LTBP3-206ENST00000526825 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
LTBP3-206ENST00000526825 GRIN2AQ12879 1464 aa26.77■■□□□ 1.88
LTBP3-206ENST00000526825 NUP160Q12769 1436 aa26.72■■□□□ 1.87
LTBP3-206ENST00000526825 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
LTBP3-206ENST00000526825 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
LTBP3-206ENST00000526825 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
LTBP3-206ENST00000526825 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
LTBP3-206ENST00000526825 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
LTBP3-206ENST00000526825 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
LTBP3-206ENST00000526825 JPH4Q96JJ6 628 aa26.52■■□□□ 1.84
LTBP3-206ENST00000526825 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
LTBP3-206ENST00000526825 IGF1RP08069 1367 aa26.42■■□□□ 1.82
LTBP3-206ENST00000526825 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms