RNA–Protein interactions for RNA: ENST00000526443.5

PSMA1-204, Transcript of proteasome subunit alpha 1, humanhuman

TSL 2

Gene PSMA1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-204ENST00000526443 AEBP2Q6ZN18 517 aaPredicted RBP14.86□□□□□ -0.03
PSMA1-204ENST00000526443 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
PSMA1-204ENST00000526443 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
PSMA1-204ENST00000526443 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
PSMA1-204ENST00000526443 FOXD1Q16676 465 aa11.9□□□□□ -0.5
PSMA1-204ENST00000526443 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
PSMA1-204ENST00000526443 PLPPR3Q6T4P5 718 aa11.36□□□□□ -0.59
PSMA1-204ENST00000526443 MSH5O43196 834 aa11.23□□□□□ -0.61
PSMA1-204ENST00000526443 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
PSMA1-204ENST00000526443 NISCHQ9Y2I1 1504 aa11.08□□□□□ -0.64
PSMA1-204ENST00000526443 MYT1Q01538 1121 aa11.05□□□□□ -0.64
PSMA1-204ENST00000526443 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
PSMA1-204ENST00000526443 PPP6R1Q9UPN7 881 aa10.93□□□□□ -0.66
PSMA1-204ENST00000526443 ADRA2BP18089 450 aa10.9□□□□□ -0.66
PSMA1-204ENST00000526443 HRCP23327 699 aa10.78□□□□□ -0.68
PSMA1-204ENST00000526443 TTBK1Q5TCY1 1321 aaPredicted RBP10.56□□□□□ -0.72
PSMA1-204ENST00000526443 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
PSMA1-204ENST00000526443 SCAF1Q9H7N4 1312 aaKnown RBP10.23□□□□□ -0.77
PSMA1-204ENST00000526443 DCAF1Q9Y4B6 1507 aa10.22□□□□□ -0.77
PSMA1-204ENST00000526443 PPARGC1BQ86YN6 1023 aaKnown RBP10.17□□□□□ -0.78
PSMA1-204ENST00000526443 CCDC180Q9P1Z9 1646 aa10.15□□□□□ -0.78
PSMA1-204ENST00000526443 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
PSMA1-204ENST00000526443 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
PSMA1-204ENST00000526443 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
PSMA1-204ENST00000526443 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
PSMA1-204ENST00000526443 MAPK8IP2Q13387 824 aaPredicted RBP10.03□□□□□ -0.8
PSMA1-204ENST00000526443 PPP4R3CPQ6ZMV5 832 aa10.02□□□□□ -0.81
PSMA1-204ENST00000526443 DMRT2Q9Y5R5 561 aa10□□□□□ -0.81
PSMA1-204ENST00000526443 CENPBP07199 599 aaPredicted RBP9.93□□□□□ -0.82
PSMA1-204ENST00000526443 CACNB1Q02641 598 aaPredicted RBP9.9□□□□□ -0.82
PSMA1-204ENST00000526443 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
PSMA1-204ENST00000526443 GTF3C3Q9Y5Q9 886 aa9.83□□□□□ -0.84
PSMA1-204ENST00000526443 ERICH6Q7L0X2 663 aa9.8□□□□□ -0.84
PSMA1-204ENST00000526443 BCL11AQ9H165 835 aa9.78□□□□□ -0.84
PSMA1-204ENST00000526443 KCNA4P22459 653 aa9.77□□□□□ -0.85
PSMA1-204ENST00000526443 CLSPNQ9HAW4 1339 aa9.75□□□□□ -0.85
PSMA1-204ENST00000526443 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
PSMA1-204ENST00000526443 SUPT5HO00267 1087 aaKnown RBP9.72□□□□□ -0.85
PSMA1-204ENST00000526443 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
PSMA1-204ENST00000526443 ANP32EQ9BTT0 268 aa9.69□□□□□ -0.86
PSMA1-204ENST00000526443 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
PSMA1-204ENST00000526443 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
PSMA1-204ENST00000526443 APLP2Q06481 763 aa9.62□□□□□ -0.87
PSMA1-204ENST00000526443 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
PSMA1-204ENST00000526443 FAM9AQ8IZU1 332 aaPredicted RBP9.62□□□□□ -0.87
PSMA1-204ENST00000526443 DCAF8L1A6NGE4 600 aa9.61□□□□□ -0.87
PSMA1-204ENST00000526443 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
PSMA1-204ENST00000526443 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
PSMA1-204ENST00000526443 RNF216Q9NWF9 866 aaPredicted RBP9.56□□□□□ -0.88
PSMA1-204ENST00000526443 TRIM41Q8WV44 630 aa9.54□□□□□ -0.88
PSMA1-204ENST00000526443 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
PSMA1-204ENST00000526443 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.89
PSMA1-204ENST00000526443 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
PSMA1-204ENST00000526443 MYT1LQ9UL68 1186 aa9.46□□□□□ -0.9
PSMA1-204ENST00000526443 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
PSMA1-204ENST00000526443 CSRNP3Q8WYN3 585 aa9.42□□□□□ -0.9
PSMA1-204ENST00000526443 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
PSMA1-204ENST00000526443 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
PSMA1-204ENST00000526443 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
PSMA1-204ENST00000526443 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
PSMA1-204ENST00000526443 SUPT16HQ9Y5B9 1047 aaKnown RBP9.34□□□□□ -0.91
PSMA1-204ENST00000526443 ERICH6BQ5W0A0 696 aa9.29□□□□□ -0.92
PSMA1-204ENST00000526443 SLC4A1APQ9BWU0 796 aaKnown RBP9.27□□□□□ -0.93
PSMA1-204ENST00000526443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
PSMA1-204ENST00000526443 MIER1Q8N108 512 aa9.26□□□□□ -0.93
PSMA1-204ENST00000526443 WRNQ14191 1432 aaPredicted RBP eCLIP9.22□□□□□ -0.93
PSMA1-204ENST00000526443 FANCIQ9NVI1 1328 aa9.2□□□□□ -0.94
PSMA1-204ENST00000526443 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
PSMA1-204ENST00000526443 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
PSMA1-204ENST00000526443 RBM19Q9Y4C8 960 aaKnown RBP9.16□□□□□ -0.94
PSMA1-204ENST00000526443 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
PSMA1-204ENST00000526443 ABCC9O60706 1549 aa9.08□□□□□ -0.96
PSMA1-204ENST00000526443 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
PSMA1-204ENST00000526443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.965e-6■■■■□ 19.5
PSMA1-204ENST00000526443 POTEHQ6S545 545 aa9.05□□□□□ -0.96
PSMA1-204ENST00000526443 DEKP35659 375 aaKnown RBP9.04□□□□□ -0.96
PSMA1-204ENST00000526443 ANO8Q9HCE9 1232 aaPredicted RBP9.03□□□□□ -0.96
PSMA1-204ENST00000526443 ZBTB22O15209 634 aa9.02□□□□□ -0.97
PSMA1-204ENST00000526443 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
PSMA1-204ENST00000526443 NEFLP07196 543 aa8.99□□□□□ -0.97
PSMA1-204ENST00000526443 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
PSMA1-204ENST00000526443 EHMT2Q96KQ7 1210 aa8.97□□□□□ -0.97
PSMA1-204ENST00000526443 U3KPZ7 1027 aaPredicted RBP8.97□□□□□ -0.97
PSMA1-204ENST00000526443 FKBP8Q14318 412 aa8.96□□□□□ -0.98
PSMA1-204ENST00000526443 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
PSMA1-204ENST00000526443 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
PSMA1-204ENST00000526443 RSF1Q96T23 1441 aaPredicted RBP8.95□□□□□ -0.98
PSMA1-204ENST00000526443 EIF5BO60841 1220 aaKnown RBP8.94□□□□□ -0.98
PSMA1-204ENST00000526443 CDK11AQ9UQ88 783 aaPredicted RBP8.94□□□□□ -0.98
PSMA1-204ENST00000526443 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
PSMA1-204ENST00000526443 EEA1Q15075 1411 aa8.9□□□□□ -0.98
PSMA1-204ENST00000526443 C11orf95C9JLR9 678 aaPredicted RBP8.9□□□□□ -0.98
PSMA1-204ENST00000526443 CCER2I3L3R5 266 aa8.9□□□□□ -0.98
PSMA1-204ENST00000526443 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
PSMA1-204ENST00000526443 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
PSMA1-204ENST00000526443 DSG3P32926 999 aa8.85□□□□□ -0.99
PSMA1-204ENST00000526443 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
PSMA1-204ENST00000526443 NOP58Q9Y2X3 529 aaKnown RBP8.84□□□□□ -0.99
PSMA1-204ENST00000526443 WASHC2AQ641Q2 1341 aa8.82□□□□□ -1
PSMA1-204ENST00000526443 PKNOX2Q96KN3 472 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms