RNA–Protein interactions for RNA: ENST00000526110.5

HSPA8-207, Transcript of heat shock protein family A (Hsp70) member 8, humanhuman

TSL 5 BASIC

Gene HSPA8, Length 1,924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA8-207ENST00000526110 TRA2AQ13595 282 aaKnown RBP eCLIP11.08□□□□□ -0.641e-32■■■■■ 68.5
HSPA8-207ENST00000526110 SF3B1O75533 1304 aaKnown RBP eCLIP12.45□□□□□ -0.429e-7■■■■■ 57.4
HSPA8-207ENST00000526110 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.8□□□□□ -0.524e-6■■■■■ 48.1
HSPA8-207ENST00000526110 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.37□□□□□ -0.431e-10■■■■■ 47.2
HSPA8-207ENST00000526110 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.871e-8■■■■■ 44.3
HSPA8-207ENST00000526110 EFTUD2Q15029 972 aaKnown RBP eCLIP12.11□□□□□ -0.471e-13■■■■■ 38.9
HSPA8-207ENST00000526110 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.58□□□□□ -0.233e-6■■■■■ 38.3
HSPA8-207ENST00000526110 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.472e-6■■■■■ 34.9
HSPA8-207ENST00000526110 SMNDC1O75940 238 aaKnown RBP eCLIP10.9□□□□□ -0.663e-35■■■■■ 27.3
HSPA8-207ENST00000526110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.22■□□□□ 0.353e-9■■■■■ 26.9
HSPA8-207ENST00000526110 RBM15Q96T37 977 aaKnown RBP eCLIP12.24□□□□□ -0.459e-8■■■■□ 26.5
HSPA8-207ENST00000526110 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.327e-11■■■■□ 25.5
HSPA8-207ENST00000526110 SRSF9Q13242 221 aaKnown RBP eCLIP7.96□□□□□ -1.131e-45■■■■□ 25.2
HSPA8-207ENST00000526110 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.529e-11■■■■□ 25.1
HSPA8-207ENST00000526110 SF3B4Q15427 424 aaKnown RBP eCLIP10.35□□□□□ -0.752e-7■■■■□ 24.8
HSPA8-207ENST00000526110 IGF2BP3O00425 579 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■■■□ 24.5
HSPA8-207ENST00000526110 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.648e-8■■■■□ 22.5
HSPA8-207ENST00000526110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.33■□□□□ 0.043e-8■■■■□ 22.2
HSPA8-207ENST00000526110 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.27e-11■■■■□ 20.6
HSPA8-207ENST00000526110 NIPBLQ6KC79 2804 aaeCLIP9.1□□□□□ -0.953e-9■■■■□ 19.3
HSPA8-207ENST00000526110 AATFQ9NY61 560 aaKnown RBP eCLIP14.11□□□□□ -0.151e-38■■■□□ 19.2
HSPA8-207ENST00000526110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.474e-11■■■□□ 18.4
HSPA8-207ENST00000526110 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.476e-7■■■□□ 17.1
HSPA8-207ENST00000526110 LARP4Q71RC2 724 aaKnown RBP eCLIP11.62□□□□□ -0.552e-16■■■□□ 16.7
HSPA8-207ENST00000526110 G3BP1Q13283 466 aaKnown RBP eCLIP14.66□□□□□ -0.062e-8■■■□□ 16.7
HSPA8-207ENST00000526110 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.322e-8■■■□□ 16.6
HSPA8-207ENST00000526110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.07□□□□□ -0.325e-16■■■□□ 16.2
HSPA8-207ENST00000526110 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.255e-12■■■□□ 15.7
HSPA8-207ENST00000526110 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.42□□□□□ -0.589e-16■■■□□ 15.3
HSPA8-207ENST00000526110 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.431e-21■■□□□ 13.8
HSPA8-207ENST00000526110 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.252e-9■■□□□ 13.7
HSPA8-207ENST00000526110 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.42e-9■■□□□ 13.3
HSPA8-207ENST00000526110 CDC40O60508 579 aaKnown RBP eCLIP10.82□□□□□ -0.682e-8■■□□□ 13.2
HSPA8-207ENST00000526110 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -02e-70■■□□□ 12.7
HSPA8-207ENST00000526110 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.68□□□□□ -0.72e-16■■□□□ 12.1
HSPA8-207ENST00000526110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.05□□□□□ -0.321e-23■■□□□ 11.8
HSPA8-207ENST00000526110 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.26e-15■□□□□ 11.3
HSPA8-207ENST00000526110 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■□□□□ 11.2
HSPA8-207ENST00000526110 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.27□□□□□ -0.613e-47■□□□□ 11.2
HSPA8-207ENST00000526110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.84■□□□□ 0.454e-7■□□□□ 11.1
HSPA8-207ENST00000526110 AARSP49588 968 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■□□□□ 10.9
HSPA8-207ENST00000526110 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.145e-66■□□□□ 10.9
HSPA8-207ENST00000526110 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.51□□□□□ -0.575e-27■□□□□ 10.8
HSPA8-207ENST00000526110 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.125e-10■□□□□ 10.8
HSPA8-207ENST00000526110 PTBP1P26599 531 aaKnown RBP eCLIP10.33□□□□□ -0.765e-37■□□□□ 10.7
HSPA8-207ENST00000526110 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.633e-8■□□□□ 10.6
HSPA8-207ENST00000526110 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.98e-7■□□□□ 10.6
HSPA8-207ENST00000526110 DKC1O60832 514 aaKnown RBP eCLIP13.16□□□□□ -0.31e-61■□□□□ 10.4
HSPA8-207ENST00000526110 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.5□□□□□ -0.413e-6■□□□□ 10.3
HSPA8-207ENST00000526110 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.97□□□□□ -0.497e-10■□□□□ 10.3
HSPA8-207ENST00000526110 PRPF4O43172 522 aaKnown RBP eCLIP12□□□□□ -0.495e-6■□□□□ 10.2
HSPA8-207ENST00000526110 TROVE2P10155 538 aaKnown RBP eCLIP11.75□□□□□ -0.534e-40■□□□□ 10
HSPA8-207ENST00000526110 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.352e-7■□□□□ 10
HSPA8-207ENST00000526110 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.362e-26■□□□□ 9.7
HSPA8-207ENST00000526110 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.15□□□□□ -0.625e-76■□□□□ 9.6
HSPA8-207ENST00000526110 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.466e-8■□□□□ 9.5
HSPA8-207ENST00000526110 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.073e-26■□□□□ 9.3
HSPA8-207ENST00000526110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.423e-7■□□□□ 9
HSPA8-207ENST00000526110 SLBPQ14493 270 aaKnown RBP eCLIP11.47□□□□□ -0.578e-8■□□□□ 9
HSPA8-207ENST00000526110 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.56□□□□□ -0.42e-26■□□□□ 8.9
HSPA8-207ENST00000526110 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.144e-16■□□□□ 8.7
HSPA8-207ENST00000526110 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.22e-7■□□□□ 8.6
HSPA8-207ENST00000526110 EIF3DO15371 548 aaKnown RBP eCLIP13.15□□□□□ -0.33e-15■□□□□ 8.3
Retrieved 63 of 63 RNA–protein pairs in 13 ms