RNA–Protein interactions for RNA: ENST00000525727.5

PTDSS2-203, Transcript of phosphatidylserine synthase 2, humanhuman

TSL 1 (best)

Gene PTDSS2, Length 837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-203ENST00000525727 NISCHQ9Y2I1 1504 aa51.72■■■■■ 5.87
PTDSS2-203ENST00000525727 ABCC9O60706 1549 aa46.71■■■■■ 5.07
PTDSS2-203ENST00000525727 CCDC180Q9P1Z9 1646 aa46.44■■■■■ 5.03
PTDSS2-203ENST00000525727 RB1CC1Q8TDY2 1594 aa44.31■■■■■ 4.68
PTDSS2-203ENST00000525727 DNAJC5BQ9UF47 199 aa44.09■■■■■ 4.65
PTDSS2-203ENST00000525727 NACADO15069 1562 aa43.97■■■■■ 4.63
PTDSS2-203ENST00000525727 DCAF8L2P0C7V8 631 aa43.72■■■■■ 4.59
PTDSS2-203ENST00000525727 PABPN1Q86U42 306 aaKnown RBP eCLIP43.48■■■■■ 4.55
PTDSS2-203ENST00000525727 MYO15BQ96JP2 1530 aa43.32■■■■■ 4.53
PTDSS2-203ENST00000525727 UNC13AQ9UPW8 1703 aa43.31■■■■■ 4.52
PTDSS2-203ENST00000525727 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
PTDSS2-203ENST00000525727 ZCCHC6Q5VYS8 1495 aaKnown RBP43■■■■■ 4.47
PTDSS2-203ENST00000525727 DCAF1Q9Y4B6 1507 aa42.7■■■■■ 4.43
PTDSS2-203ENST00000525727 SHROOM4Q9ULL8 1493 aa42.44■■■■■ 4.38
PTDSS2-203ENST00000525727 SCRIBQ14160 1630 aa42.34■■■■■ 4.37
PTDSS2-203ENST00000525727 CC2D2AQ9P2K1 1620 aa42.17■■■■■ 4.34
PTDSS2-203ENST00000525727 CECR2Q9BXF3 1484 aa42.09■■■■■ 4.33
PTDSS2-203ENST00000525727 EIF4G1Q04637 1599 aaKnown RBP42.03■■■■■ 4.32
PTDSS2-203ENST00000525727 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
PTDSS2-203ENST00000525727 DNAJC5Q9H3Z4 198 aa40.59■■■■■ 4.09
PTDSS2-203ENST00000525727 ATAD2BQ9ULI0 1458 aa40.49■■■■■ 4.07
PTDSS2-203ENST00000525727 SMARCA4P51532 1647 aa40.37■■■■■ 4.05
PTDSS2-203ENST00000525727 SMARCA2P51531 1590 aa40.32■■■■■ 4.05
PTDSS2-203ENST00000525727 CUX2O14529 1486 aa40.32■■■■■ 4.04
PTDSS2-203ENST00000525727 ERCC6Q03468 1493 aa40.3■■■■■ 4.04
PTDSS2-203ENST00000525727 HMGXB3Q12766 1538 aa40.29■■■■■ 4.04
PTDSS2-203ENST00000525727 BAZ1AQ9NRL2 1556 aaPredicted RBP40.13■■■■■ 4.01
PTDSS2-203ENST00000525727 NESP48681 1621 aa40.09■■■■■ 4.01
PTDSS2-203ENST00000525727 BAZ1BQ9UIG0 1483 aaKnown RBP40.05■■■■■ 4
PTDSS2-203ENST00000525727 PEG3Q9GZU2 1588 aa39.99■■■■□ 3.99
PTDSS2-203ENST00000525727 MROH2BQ7Z745 1585 aa39.87■■■■□ 3.97
PTDSS2-203ENST00000525727 LAMC3Q9Y6N6 1575 aa39.72■■■■□ 3.95
PTDSS2-203ENST00000525727 THOC2Q8NI27 1593 aaKnown RBP39.69■■■■□ 3.94
PTDSS2-203ENST00000525727 PDS5BQ9NTI5 1447 aa39.5■■■■□ 3.91
PTDSS2-203ENST00000525727 KIF21AQ7Z4S6 1674 aa39.5■■■■□ 3.91
PTDSS2-203ENST00000525727 CADPSQ9ULU8 1353 aa39.39■■■■□ 3.9
PTDSS2-203ENST00000525727 RSF1Q96T23 1441 aaPredicted RBP39.36■■■■□ 3.89
PTDSS2-203ENST00000525727 WIZO95785 1651 aa39.35■■■■□ 3.89
PTDSS2-203ENST00000525727 MRC2Q9UBG0 1479 aa39.18■■■■□ 3.86
PTDSS2-203ENST00000525727 WDR62O43379 1518 aa39.1■■■■□ 3.85
PTDSS2-203ENST00000525727 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
PTDSS2-203ENST00000525727 TOP2AP11388 1531 aaKnown RBP38.94■■■■□ 3.82
PTDSS2-203ENST00000525727 FANCD2Q9BXW9 1451 aa38.93■■■■□ 3.82
PTDSS2-203ENST00000525727 CFTRP13569 1480 aa38.91■■■■□ 3.82
PTDSS2-203ENST00000525727 TRIM41Q8WV44 630 aa38.67■■■■□ 3.78
PTDSS2-203ENST00000525727 URB2Q14146 1524 aaKnown RBP38.66■■■■□ 3.78
PTDSS2-203ENST00000525727 CCDC88BA6NC98 1476 aa38.5■■■■□ 3.75
PTDSS2-203ENST00000525727 OSCARQ8IYS5 282 aa38.45■■■■□ 3.75
PTDSS2-203ENST00000525727 PRDM2Q13029 1718 aa38.4■■■■□ 3.74
PTDSS2-203ENST00000525727 SUPT5HO00267 1087 aaKnown RBP38.37■■■■□ 3.73
PTDSS2-203ENST00000525727 ZNF608Q9ULD9 1512 aaPredicted RBP38.22■■■■□ 3.71
PTDSS2-203ENST00000525727 IFT140Q96RY7 1462 aa38.22■■■■□ 3.71
PTDSS2-203ENST00000525727 TOPBP1Q92547 1522 aa38.18■■■■□ 3.7
PTDSS2-203ENST00000525727 ABCC8Q09428 1581 aa38.04■■■■□ 3.68
PTDSS2-203ENST00000525727 DNMBPQ6XZF7 1577 aa38■■■■□ 3.67
PTDSS2-203ENST00000525727 RIMBP3CA6NJZ7 1639 aa37.97■■■■□ 3.67
PTDSS2-203ENST00000525727 RIMBP3BA6NNM3 1639 aa37.97■■■■□ 3.67
PTDSS2-203ENST00000525727 RIMBP3Q9UFD9 1639 aa37.97■■■■□ 3.67
PTDSS2-203ENST00000525727 EIF4G3O43432 1585 aaKnown RBP37.95■■■■□ 3.67
PTDSS2-203ENST00000525727 TARBP1Q13395 1621 aaKnown RBP37.86■■■■□ 3.65
PTDSS2-203ENST00000525727 ARHGEF11O15085 1522 aa37.84■■■■□ 3.65
PTDSS2-203ENST00000525727 AQRO60306 1485 aaKnown RBP eCLIP37.84■■■■□ 3.65
PTDSS2-203ENST00000525727 POLA1P09884 1462 aaPredicted RBP37.78■■■■□ 3.64
PTDSS2-203ENST00000525727 CHD1O14646 1710 aa37.69■■■■□ 3.62
PTDSS2-203ENST00000525727 RAD54L2Q9Y4B4 1467 aa37.66■■■■□ 3.62
PTDSS2-203ENST00000525727 SOGA1O94964 1423 aa37.6■■■■□ 3.61
PTDSS2-203ENST00000525727 FBLN2P98095 1184 aa37.59■■■■□ 3.61
PTDSS2-203ENST00000525727 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
PTDSS2-203ENST00000525727 CYB5RLQ6IPT4 315 aa37.58■■■■□ 3.61
PTDSS2-203ENST00000525727 FGD5Q6ZNL6 1462 aa37.51■■■■□ 3.59
PTDSS2-203ENST00000525727 ARAP1Q96P48 1450 aa37.48■■■■□ 3.59
PTDSS2-203ENST00000525727 CUX1P39880 1505 aa37.46■■■■□ 3.59
PTDSS2-203ENST00000525727 SNAPC4Q5SXM2 1469 aa37.43■■■■□ 3.58
PTDSS2-203ENST00000525727 WDR97A6NE52 1622 aa37.4■■■■□ 3.58
PTDSS2-203ENST00000525727 MAGI1Q96QZ7 1491 aaPredicted RBP37.3■■■■□ 3.56
PTDSS2-203ENST00000525727 CLASP1Q7Z460 1538 aa37.3■■■■□ 3.56
PTDSS2-203ENST00000525727 GRIN2BQ13224 1484 aa37.29■■■■□ 3.56
PTDSS2-203ENST00000525727 CHMP7Q8WUX9 453 aaPredicted RBP37.28■■■■□ 3.56
PTDSS2-203ENST00000525727 SYNJ1O43426 1573 aa37.21■■■■□ 3.55
PTDSS2-203ENST00000525727 SYNJ2O15056 1496 aa37.2■■■■□ 3.54
PTDSS2-203ENST00000525727 TRHP20396 242 aaPredicted RBP37.19■■■■□ 3.54
PTDSS2-203ENST00000525727 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.54
PTDSS2-203ENST00000525727 WRNQ14191 1432 aaPredicted RBP eCLIP37.1■■■■□ 3.53
PTDSS2-203ENST00000525727 PBRM1Q86U86 1689 aa37.09■■■■□ 3.53
PTDSS2-203ENST00000525727 ABCA10Q8WWZ4 1543 aa37.07■■■■□ 3.53
PTDSS2-203ENST00000525727 ABCA5Q8WWZ7 1642 aa37.03■■■■□ 3.52
PTDSS2-203ENST00000525727 TOP2BQ02880 1626 aa36.98■■■■□ 3.51
PTDSS2-203ENST00000525727 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
PTDSS2-203ENST00000525727 GRIN2AQ12879 1464 aa36.82■■■■□ 3.48
PTDSS2-203ENST00000525727 ADAMTS12P58397 1594 aa36.76■■■■□ 3.48
PTDSS2-203ENST00000525727 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
PTDSS2-203ENST00000525727 NUP160Q12769 1436 aa36.72■■■■□ 3.47
PTDSS2-203ENST00000525727 CEP170Q5SW79 1584 aa36.7■■■■□ 3.47
PTDSS2-203ENST00000525727 FHAD1B1AJZ9 1412 aa36.66■■■■□ 3.46
PTDSS2-203ENST00000525727 ERICH3Q5RHP9 1530 aa36.59■■■■□ 3.45
PTDSS2-203ENST00000525727 SHROOM2Q13796 1616 aa36.56■■■■□ 3.44
PTDSS2-203ENST00000525727 PRG4Q92954 1404 aaPredicted RBP36.37■■■■□ 3.41
PTDSS2-203ENST00000525727 JPH4Q96JJ6 628 aa36.34■■■■□ 3.41
PTDSS2-203ENST00000525727 KIF27Q86VH2 1401 aa36.31■■■■□ 3.4
PTDSS2-203ENST00000525727 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms