RNA–Protein interactions for RNA: ENST00000525693.5

RELA-205, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 1 (best) BASIC

Gene RELA, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-205ENST00000525693 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
RELA-205ENST00000525693 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
RELA-205ENST00000525693 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
RELA-205ENST00000525693 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
RELA-205ENST00000525693 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
RELA-205ENST00000525693 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
RELA-205ENST00000525693 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
RELA-205ENST00000525693 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
RELA-205ENST00000525693 ABCC9O60706 1549 aa18.74■□□□□ 0.59
RELA-205ENST00000525693 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
RELA-205ENST00000525693 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
RELA-205ENST00000525693 NACADO15069 1562 aa18.43■□□□□ 0.54
RELA-205ENST00000525693 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
RELA-205ENST00000525693 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
RELA-205ENST00000525693 HRCP23327 699 aa18.31■□□□□ 0.52
RELA-205ENST00000525693 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
RELA-205ENST00000525693 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
RELA-205ENST00000525693 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
RELA-205ENST00000525693 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
RELA-205ENST00000525693 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
RELA-205ENST00000525693 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
RELA-205ENST00000525693 WIZO95785 1651 aa17.97■□□□□ 0.47
RELA-205ENST00000525693 TRIM26Q12899 539 aaPredicted RBP17.92■□□□□ 0.46
RELA-205ENST00000525693 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
RELA-205ENST00000525693 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
RELA-205ENST00000525693 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.44
RELA-205ENST00000525693 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
RELA-205ENST00000525693 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
RELA-205ENST00000525693 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
RELA-205ENST00000525693 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
RELA-205ENST00000525693 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
RELA-205ENST00000525693 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RELA-205ENST00000525693 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
RELA-205ENST00000525693 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
RELA-205ENST00000525693 EEA1Q15075 1411 aa17.49■□□□□ 0.39
RELA-205ENST00000525693 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
RELA-205ENST00000525693 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
RELA-205ENST00000525693 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
RELA-205ENST00000525693 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
RELA-205ENST00000525693 KIF21BO75037 1637 aa17.3■□□□□ 0.36
RELA-205ENST00000525693 SOGA1O94964 1423 aa17.29■□□□□ 0.36
RELA-205ENST00000525693 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
RELA-205ENST00000525693 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
RELA-205ENST00000525693 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
RELA-205ENST00000525693 RUSC2Q8N2Y8 1516 aa17.19■□□□□ 0.34
RELA-205ENST00000525693 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
RELA-205ENST00000525693 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
RELA-205ENST00000525693 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
RELA-205ENST00000525693 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
RELA-205ENST00000525693 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
RELA-205ENST00000525693 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
RELA-205ENST00000525693 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RELA-205ENST00000525693 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.324e-10■□□□□ 10.7
RELA-205ENST00000525693 ERICH3Q5RHP9 1530 aa17.01■□□□□ 0.31
RELA-205ENST00000525693 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
RELA-205ENST00000525693 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
RELA-205ENST00000525693 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
RELA-205ENST00000525693 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
RELA-205ENST00000525693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
RELA-205ENST00000525693 CLIP1P30622 1438 aa16.96■□□□□ 0.3
RELA-205ENST00000525693 UBTFP17480 764 aaKnown RBP16.93■□□□□ 0.3
RELA-205ENST00000525693 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
RELA-205ENST00000525693 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
RELA-205ENST00000525693 CUX1P39880 1505 aa16.84■□□□□ 0.29
RELA-205ENST00000525693 CFTRP13569 1480 aa16.83■□□□□ 0.28
RELA-205ENST00000525693 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
RELA-205ENST00000525693 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
RELA-205ENST00000525693 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
RELA-205ENST00000525693 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
RELA-205ENST00000525693 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
RELA-205ENST00000525693 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
RELA-205ENST00000525693 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
RELA-205ENST00000525693 CLSPNQ9HAW4 1339 aa16.68■□□□□ 0.26
RELA-205ENST00000525693 CUX2O14529 1486 aa16.68■□□□□ 0.26
RELA-205ENST00000525693 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
RELA-205ENST00000525693 MAP3K1Q13233 1512 aa16.66■□□□□ 0.26
RELA-205ENST00000525693 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
RELA-205ENST00000525693 APLP2Q06481 763 aa16.61■□□□□ 0.25
RELA-205ENST00000525693 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
RELA-205ENST00000525693 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
RELA-205ENST00000525693 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
RELA-205ENST00000525693 DHX57Q6P158 1386 aaKnown RBP16.53■□□□□ 0.24
RELA-205ENST00000525693 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
RELA-205ENST00000525693 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
RELA-205ENST00000525693 TIAM1Q13009 1591 aa16.51■□□□□ 0.23
RELA-205ENST00000525693 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
RELA-205ENST00000525693 IGF1RP08069 1367 aa16.51■□□□□ 0.23
RELA-205ENST00000525693 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
RELA-205ENST00000525693 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
RELA-205ENST00000525693 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
RELA-205ENST00000525693 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
RELA-205ENST00000525693 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
RELA-205ENST00000525693 CUL7Q14999 1698 aa16.42■□□□□ 0.22
RELA-205ENST00000525693 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
RELA-205ENST00000525693 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
RELA-205ENST00000525693 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
RELA-205ENST00000525693 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
RELA-205ENST00000525693 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
RELA-205ENST00000525693 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
RELA-205ENST00000525693 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.215e-7■■■■■ 31.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms