RNA–Protein interactions for RNA: ENST00000525686.1

MS4A3-204, Transcript of membrane spanning 4-domains A3, humanhuman

TSL 3

Gene MS4A3, Length 746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3-204ENST00000525686 NISCHQ9Y2I1 1504 aa28.45■■■□□ 2.15
MS4A3-204ENST00000525686 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.65
MS4A3-204ENST00000525686 ABCC9O60706 1549 aa24.89■■□□□ 1.57
MS4A3-204ENST00000525686 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
MS4A3-204ENST00000525686 NACADO15069 1562 aa23.9■■□□□ 1.42
MS4A3-204ENST00000525686 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
MS4A3-204ENST00000525686 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
MS4A3-204ENST00000525686 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
MS4A3-204ENST00000525686 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
MS4A3-204ENST00000525686 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
MS4A3-204ENST00000525686 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
MS4A3-204ENST00000525686 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
MS4A3-204ENST00000525686 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
MS4A3-204ENST00000525686 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
MS4A3-204ENST00000525686 SHROOM4Q9ULL8 1493 aa22.99■■□□□ 1.27
MS4A3-204ENST00000525686 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
MS4A3-204ENST00000525686 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
MS4A3-204ENST00000525686 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
MS4A3-204ENST00000525686 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
MS4A3-204ENST00000525686 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
MS4A3-204ENST00000525686 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
MS4A3-204ENST00000525686 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
MS4A3-204ENST00000525686 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
MS4A3-204ENST00000525686 SMARCA2P51531 1590 aa22■■□□□ 1.11
MS4A3-204ENST00000525686 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
MS4A3-204ENST00000525686 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
MS4A3-204ENST00000525686 MROH2BQ7Z745 1585 aa21.88■■□□□ 1.09
MS4A3-204ENST00000525686 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
MS4A3-204ENST00000525686 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
MS4A3-204ENST00000525686 WIZO95785 1651 aa21.62■■□□□ 1.05
MS4A3-204ENST00000525686 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
MS4A3-204ENST00000525686 NESP48681 1621 aa21.48■■□□□ 1.03
MS4A3-204ENST00000525686 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
MS4A3-204ENST00000525686 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
MS4A3-204ENST00000525686 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
MS4A3-204ENST00000525686 TOP2AP11388 1531 aaKnown RBP21.41■■□□□ 1.02
MS4A3-204ENST00000525686 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
MS4A3-204ENST00000525686 CUX2O14529 1486 aa21.35■■□□□ 1.01
MS4A3-204ENST00000525686 CFTRP13569 1480 aa21.25■□□□□ 0.99
MS4A3-204ENST00000525686 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
MS4A3-204ENST00000525686 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
MS4A3-204ENST00000525686 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
MS4A3-204ENST00000525686 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
MS4A3-204ENST00000525686 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
MS4A3-204ENST00000525686 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
MS4A3-204ENST00000525686 WDR62O43379 1518 aa21.02■□□□□ 0.96
MS4A3-204ENST00000525686 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
MS4A3-204ENST00000525686 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
MS4A3-204ENST00000525686 DNAJC5Q9H3Z4 198 aa20.92■□□□□ 0.94
MS4A3-204ENST00000525686 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
MS4A3-204ENST00000525686 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
MS4A3-204ENST00000525686 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
MS4A3-204ENST00000525686 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
MS4A3-204ENST00000525686 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
MS4A3-204ENST00000525686 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
MS4A3-204ENST00000525686 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
MS4A3-204ENST00000525686 SOGA1O94964 1423 aa20.54■□□□□ 0.88
MS4A3-204ENST00000525686 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
MS4A3-204ENST00000525686 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
MS4A3-204ENST00000525686 CUX1P39880 1505 aa20.53■□□□□ 0.88
MS4A3-204ENST00000525686 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
MS4A3-204ENST00000525686 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
MS4A3-204ENST00000525686 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
MS4A3-204ENST00000525686 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
MS4A3-204ENST00000525686 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
MS4A3-204ENST00000525686 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
MS4A3-204ENST00000525686 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
MS4A3-204ENST00000525686 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
MS4A3-204ENST00000525686 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
MS4A3-204ENST00000525686 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
MS4A3-204ENST00000525686 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
MS4A3-204ENST00000525686 FBLN2P98095 1184 aa20.3■□□□□ 0.84
MS4A3-204ENST00000525686 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
MS4A3-204ENST00000525686 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
MS4A3-204ENST00000525686 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
MS4A3-204ENST00000525686 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
MS4A3-204ENST00000525686 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
MS4A3-204ENST00000525686 CHD1O14646 1710 aa20.21■□□□□ 0.83
MS4A3-204ENST00000525686 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
MS4A3-204ENST00000525686 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
MS4A3-204ENST00000525686 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
MS4A3-204ENST00000525686 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
MS4A3-204ENST00000525686 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
MS4A3-204ENST00000525686 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
MS4A3-204ENST00000525686 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
MS4A3-204ENST00000525686 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
MS4A3-204ENST00000525686 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
MS4A3-204ENST00000525686 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
MS4A3-204ENST00000525686 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.79
MS4A3-204ENST00000525686 KIF27Q86VH2 1401 aa20.02■□□□□ 0.79
MS4A3-204ENST00000525686 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
MS4A3-204ENST00000525686 ADAMTS12P58397 1594 aa20■□□□□ 0.79
MS4A3-204ENST00000525686 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
MS4A3-204ENST00000525686 IGF1RP08069 1367 aa19.96■□□□□ 0.79
MS4A3-204ENST00000525686 NUP160Q12769 1436 aa19.94■□□□□ 0.78
MS4A3-204ENST00000525686 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
MS4A3-204ENST00000525686 CEP170Q5SW79 1584 aa19.87■□□□□ 0.77
MS4A3-204ENST00000525686 CUL7Q14999 1698 aa19.85■□□□□ 0.77
MS4A3-204ENST00000525686 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.77
MS4A3-204ENST00000525686 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms