RNA–Protein interactions for RNA: ENST00000525399.2

PPM1A-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 3

Gene PPM1A, Length 854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-204ENST00000525399 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
PPM1A-204ENST00000525399 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PPM1A-204ENST00000525399 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
PPM1A-204ENST00000525399 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
PPM1A-204ENST00000525399 FOXD1Q16676 465 aa20.85■□□□□ 0.93
PPM1A-204ENST00000525399 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
PPM1A-204ENST00000525399 MSH5O43196 834 aa19.71■□□□□ 0.75
PPM1A-204ENST00000525399 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
PPM1A-204ENST00000525399 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
PPM1A-204ENST00000525399 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
PPM1A-204ENST00000525399 ADRA2BP18089 450 aa19.18■□□□□ 0.66
PPM1A-204ENST00000525399 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
PPM1A-204ENST00000525399 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
PPM1A-204ENST00000525399 DMRT2Q9Y5R5 561 aa17.73■□□□□ 0.43
PPM1A-204ENST00000525399 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
PPM1A-204ENST00000525399 ABCC9O60706 1549 aa17.49■□□□□ 0.39
PPM1A-204ENST00000525399 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
PPM1A-204ENST00000525399 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
PPM1A-204ENST00000525399 CNKSR2Q8WXI2 1034 aa17.06■□□□□ 0.32
PPM1A-204ENST00000525399 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
PPM1A-204ENST00000525399 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
PPM1A-204ENST00000525399 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
PPM1A-204ENST00000525399 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
PPM1A-204ENST00000525399 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
PPM1A-204ENST00000525399 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
PPM1A-204ENST00000525399 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
PPM1A-204ENST00000525399 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
PPM1A-204ENST00000525399 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
PPM1A-204ENST00000525399 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
PPM1A-204ENST00000525399 NACADO15069 1562 aa16.38■□□□□ 0.21
PPM1A-204ENST00000525399 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
PPM1A-204ENST00000525399 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
PPM1A-204ENST00000525399 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
PPM1A-204ENST00000525399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
PPM1A-204ENST00000525399 KCNA4P22459 653 aa16.13■□□□□ 0.17
PPM1A-204ENST00000525399 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
PPM1A-204ENST00000525399 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
PPM1A-204ENST00000525399 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
PPM1A-204ENST00000525399 CC2D2AQ9P2K1 1620 aa15.83■□□□□ 0.12
PPM1A-204ENST00000525399 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
PPM1A-204ENST00000525399 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
PPM1A-204ENST00000525399 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
PPM1A-204ENST00000525399 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
PPM1A-204ENST00000525399 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.11
PPM1A-204ENST00000525399 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
PPM1A-204ENST00000525399 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
PPM1A-204ENST00000525399 CAPN15O75808 1086 aa15.59■□□□□ 0.09
PPM1A-204ENST00000525399 DSG3P32926 999 aa15.58■□□□□ 0.08
PPM1A-204ENST00000525399 SPINK5Q9NQ38 1064 aaPredicted RBP15.58■□□□□ 0.08
PPM1A-204ENST00000525399 APLP2Q06481 763 aa15.56■□□□□ 0.08
PPM1A-204ENST00000525399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
PPM1A-204ENST00000525399 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
PPM1A-204ENST00000525399 DNAJC5Q9H3Z4 198 aa15.49■□□□□ 0.07
PPM1A-204ENST00000525399 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
PPM1A-204ENST00000525399 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
PPM1A-204ENST00000525399 POTEHQ6S545 545 aa15.32■□□□□ 0.04
PPM1A-204ENST00000525399 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
PPM1A-204ENST00000525399 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
PPM1A-204ENST00000525399 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.04
PPM1A-204ENST00000525399 CUX2O14529 1486 aa15.2■□□□□ 0.02
PPM1A-204ENST00000525399 ABCB7O75027 752 aa15.16■□□□□ 0.02
PPM1A-204ENST00000525399 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
PPM1A-204ENST00000525399 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
PPM1A-204ENST00000525399 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
PPM1A-204ENST00000525399 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
PPM1A-204ENST00000525399 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
PPM1A-204ENST00000525399 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
PPM1A-204ENST00000525399 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
PPM1A-204ENST00000525399 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
PPM1A-204ENST00000525399 NESP48681 1621 aa14.95□□□□□ -0.02
PPM1A-204ENST00000525399 POLA2Q14181 598 aa14.9□□□□□ -0.02
PPM1A-204ENST00000525399 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
PPM1A-204ENST00000525399 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
PPM1A-204ENST00000525399 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
PPM1A-204ENST00000525399 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
PPM1A-204ENST00000525399 LAMC3Q9Y6N6 1575 aa14.83□□□□□ -0.04
PPM1A-204ENST00000525399 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
PPM1A-204ENST00000525399 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PPM1A-204ENST00000525399 ATF5Q9Y2D1 282 aaPredicted RBP14.76□□□□□ -0.05
PPM1A-204ENST00000525399 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
PPM1A-204ENST00000525399 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
PPM1A-204ENST00000525399 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
PPM1A-204ENST00000525399 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
PPM1A-204ENST00000525399 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
PPM1A-204ENST00000525399 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
PPM1A-204ENST00000525399 CADPSQ9ULU8 1353 aa14.62□□□□□ -0.07
PPM1A-204ENST00000525399 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
PPM1A-204ENST00000525399 WDR62O43379 1518 aa14.61□□□□□ -0.07
PPM1A-204ENST00000525399 WIZO95785 1651 aa14.53□□□□□ -0.08
PPM1A-204ENST00000525399 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
PPM1A-204ENST00000525399 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
PPM1A-204ENST00000525399 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
PPM1A-204ENST00000525399 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
PPM1A-204ENST00000525399 CFTRP13569 1480 aa14.42□□□□□ -0.1
PPM1A-204ENST00000525399 URB2Q14146 1524 aaKnown RBP14.37□□□□□ -0.11
PPM1A-204ENST00000525399 FBLN2P98095 1184 aa14.37□□□□□ -0.11
PPM1A-204ENST00000525399 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
PPM1A-204ENST00000525399 PRDM2Q13029 1718 aa14.33□□□□□ -0.12
PPM1A-204ENST00000525399 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
PPM1A-204ENST00000525399 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms