RNA–Protein interactions for RNA: ENST00000525317.5

CHORDC1-203, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 5

Gene CHORDC1, Length 1,136 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-203ENST00000525317 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
CHORDC1-203ENST00000525317 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
CHORDC1-203ENST00000525317 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
CHORDC1-203ENST00000525317 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
CHORDC1-203ENST00000525317 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
CHORDC1-203ENST00000525317 FOXD1Q16676 465 aa21.83■■□□□ 1.09
CHORDC1-203ENST00000525317 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
CHORDC1-203ENST00000525317 ADRA2BP18089 450 aa20.93■□□□□ 0.94
CHORDC1-203ENST00000525317 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
CHORDC1-203ENST00000525317 NISCHQ9Y2I1 1504 aa20.32■□□□□ 0.84
CHORDC1-203ENST00000525317 MSH5O43196 834 aa20.19■□□□□ 0.82
CHORDC1-203ENST00000525317 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
CHORDC1-203ENST00000525317 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
CHORDC1-203ENST00000525317 POTEDQ86YR6 584 aa19.06■□□□□ 0.64
CHORDC1-203ENST00000525317 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
CHORDC1-203ENST00000525317 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
CHORDC1-203ENST00000525317 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
CHORDC1-203ENST00000525317 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
CHORDC1-203ENST00000525317 KCNA4P22459 653 aa18.76■□□□□ 0.59
CHORDC1-203ENST00000525317 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
CHORDC1-203ENST00000525317 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
CHORDC1-203ENST00000525317 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
CHORDC1-203ENST00000525317 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
CHORDC1-203ENST00000525317 ABCC9O60706 1549 aa17.98■□□□□ 0.47
CHORDC1-203ENST00000525317 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
CHORDC1-203ENST00000525317 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
CHORDC1-203ENST00000525317 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
CHORDC1-203ENST00000525317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHORDC1-203ENST00000525317 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
CHORDC1-203ENST00000525317 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
CHORDC1-203ENST00000525317 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
CHORDC1-203ENST00000525317 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
CHORDC1-203ENST00000525317 ZBTB22O15209 634 aa17.26■□□□□ 0.35
CHORDC1-203ENST00000525317 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
CHORDC1-203ENST00000525317 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
CHORDC1-203ENST00000525317 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
CHORDC1-203ENST00000525317 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
CHORDC1-203ENST00000525317 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
CHORDC1-203ENST00000525317 NACADO15069 1562 aa17.07■□□□□ 0.32
CHORDC1-203ENST00000525317 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
CHORDC1-203ENST00000525317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
CHORDC1-203ENST00000525317 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
CHORDC1-203ENST00000525317 SAMD1Q6SPF0 538 aaPredicted RBP16.93■□□□□ 0.3
CHORDC1-203ENST00000525317 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
CHORDC1-203ENST00000525317 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
CHORDC1-203ENST00000525317 CACNB1Q02641 598 aaPredicted RBP16.88■□□□□ 0.29
CHORDC1-203ENST00000525317 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
CHORDC1-203ENST00000525317 APLP2Q06481 763 aa16.84■□□□□ 0.29
CHORDC1-203ENST00000525317 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHORDC1-203ENST00000525317 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
CHORDC1-203ENST00000525317 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
CHORDC1-203ENST00000525317 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
CHORDC1-203ENST00000525317 CAPN15O75808 1086 aa16.69■□□□□ 0.26
CHORDC1-203ENST00000525317 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
CHORDC1-203ENST00000525317 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
CHORDC1-203ENST00000525317 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
CHORDC1-203ENST00000525317 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
CHORDC1-203ENST00000525317 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
CHORDC1-203ENST00000525317 DSG3P32926 999 aa16.42■□□□□ 0.22
CHORDC1-203ENST00000525317 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
CHORDC1-203ENST00000525317 ABCB7O75027 752 aa16.36■□□□□ 0.21
CHORDC1-203ENST00000525317 POLA2Q14181 598 aa16.31■□□□□ 0.2
CHORDC1-203ENST00000525317 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
CHORDC1-203ENST00000525317 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
CHORDC1-203ENST00000525317 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
CHORDC1-203ENST00000525317 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
CHORDC1-203ENST00000525317 FBLN2P98095 1184 aa15.97■□□□□ 0.15
CHORDC1-203ENST00000525317 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
CHORDC1-203ENST00000525317 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
CHORDC1-203ENST00000525317 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
CHORDC1-203ENST00000525317 OSCARQ8IYS5 282 aa15.76■□□□□ 0.11
CHORDC1-203ENST00000525317 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
CHORDC1-203ENST00000525317 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
CHORDC1-203ENST00000525317 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
CHORDC1-203ENST00000525317 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
CHORDC1-203ENST00000525317 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
CHORDC1-203ENST00000525317 RBM42Q9BTD8 480 aaKnown RBP15.67■□□□□ 0.1
CHORDC1-203ENST00000525317 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
CHORDC1-203ENST00000525317 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
CHORDC1-203ENST00000525317 SPDYE2BA6NHP3 402 aa15.61■□□□□ 0.09
CHORDC1-203ENST00000525317 SPDYE6P0CI01 402 aa15.61■□□□□ 0.09
CHORDC1-203ENST00000525317 SPDYE2Q495Y8 402 aa15.61■□□□□ 0.09
CHORDC1-203ENST00000525317 WIZO95785 1651 aa15.57■□□□□ 0.08
CHORDC1-203ENST00000525317 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
CHORDC1-203ENST00000525317 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
CHORDC1-203ENST00000525317 NESP48681 1621 aa15.51■□□□□ 0.07
CHORDC1-203ENST00000525317 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
CHORDC1-203ENST00000525317 FKBP8Q14318 412 aa15.49■□□□□ 0.07
CHORDC1-203ENST00000525317 SSUH2Q9Y2M2 353 aa15.47■□□□□ 0.07
CHORDC1-203ENST00000525317 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
CHORDC1-203ENST00000525317 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
CHORDC1-203ENST00000525317 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
CHORDC1-203ENST00000525317 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
CHORDC1-203ENST00000525317 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
CHORDC1-203ENST00000525317 CUX2O14529 1486 aa15.32■□□□□ 0.04
CHORDC1-203ENST00000525317 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
CHORDC1-203ENST00000525317 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
CHORDC1-203ENST00000525317 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
CHORDC1-203ENST00000525317 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
CHORDC1-203ENST00000525317 PROM2Q8N271 834 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms