RNA–Protein interactions for RNA: ENST00000524510.1

NECTIN1-205, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 5

Gene NECTIN1, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-205ENST00000524510 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
NECTIN1-205ENST00000524510 ABCC9O60706 1549 aa29.28■■■□□ 2.28
NECTIN1-205ENST00000524510 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.27
NECTIN1-205ENST00000524510 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
NECTIN1-205ENST00000524510 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
NECTIN1-205ENST00000524510 NACADO15069 1562 aa27.7■■■□□ 2.03
NECTIN1-205ENST00000524510 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
NECTIN1-205ENST00000524510 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
NECTIN1-205ENST00000524510 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
NECTIN1-205ENST00000524510 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
NECTIN1-205ENST00000524510 DCAF1Q9Y4B6 1507 aa27.04■■□□□ 1.92
NECTIN1-205ENST00000524510 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
NECTIN1-205ENST00000524510 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
NECTIN1-205ENST00000524510 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
NECTIN1-205ENST00000524510 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
NECTIN1-205ENST00000524510 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
NECTIN1-205ENST00000524510 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
NECTIN1-205ENST00000524510 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
NECTIN1-205ENST00000524510 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
NECTIN1-205ENST00000524510 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
NECTIN1-205ENST00000524510 SMARCA4P51532 1647 aa25.45■■□□□ 1.66
NECTIN1-205ENST00000524510 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
NECTIN1-205ENST00000524510 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
NECTIN1-205ENST00000524510 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
NECTIN1-205ENST00000524510 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
NECTIN1-205ENST00000524510 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
NECTIN1-205ENST00000524510 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
NECTIN1-205ENST00000524510 DNAJC5Q9H3Z4 198 aa25.23■■□□□ 1.63
NECTIN1-205ENST00000524510 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
NECTIN1-205ENST00000524510 CUX2O14529 1486 aa25.21■■□□□ 1.63
NECTIN1-205ENST00000524510 NESP48681 1621 aa25.15■■□□□ 1.62
NECTIN1-205ENST00000524510 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
NECTIN1-205ENST00000524510 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
NECTIN1-205ENST00000524510 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
NECTIN1-205ENST00000524510 WIZO95785 1651 aa24.84■■□□□ 1.57
NECTIN1-205ENST00000524510 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
NECTIN1-205ENST00000524510 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
NECTIN1-205ENST00000524510 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
NECTIN1-205ENST00000524510 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
NECTIN1-205ENST00000524510 CFTRP13569 1480 aa24.58■■□□□ 1.53
NECTIN1-205ENST00000524510 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
NECTIN1-205ENST00000524510 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
NECTIN1-205ENST00000524510 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
NECTIN1-205ENST00000524510 WDR62O43379 1518 aa24.54■■□□□ 1.52
NECTIN1-205ENST00000524510 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
NECTIN1-205ENST00000524510 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
NECTIN1-205ENST00000524510 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
NECTIN1-205ENST00000524510 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
NECTIN1-205ENST00000524510 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
NECTIN1-205ENST00000524510 TOPBP1Q92547 1522 aa24.07■■□□□ 1.44
NECTIN1-205ENST00000524510 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
NECTIN1-205ENST00000524510 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
NECTIN1-205ENST00000524510 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
NECTIN1-205ENST00000524510 DNMBPQ6XZF7 1577 aa23.95■■□□□ 1.43
NECTIN1-205ENST00000524510 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.41
NECTIN1-205ENST00000524510 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
NECTIN1-205ENST00000524510 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
NECTIN1-205ENST00000524510 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
NECTIN1-205ENST00000524510 SOGA1O94964 1423 aa23.79■■□□□ 1.4
NECTIN1-205ENST00000524510 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
NECTIN1-205ENST00000524510 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
NECTIN1-205ENST00000524510 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
NECTIN1-205ENST00000524510 FBLN2P98095 1184 aa23.72■■□□□ 1.39
NECTIN1-205ENST00000524510 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
NECTIN1-205ENST00000524510 CUX1P39880 1505 aa23.67■■□□□ 1.38
NECTIN1-205ENST00000524510 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
NECTIN1-205ENST00000524510 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
NECTIN1-205ENST00000524510 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
NECTIN1-205ENST00000524510 ARHGEF11O15085 1522 aa23.66■■□□□ 1.38
NECTIN1-205ENST00000524510 CYB5RLQ6IPT4 315 aa23.59■■□□□ 1.37
NECTIN1-205ENST00000524510 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
NECTIN1-205ENST00000524510 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
NECTIN1-205ENST00000524510 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
NECTIN1-205ENST00000524510 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
NECTIN1-205ENST00000524510 CHD1O14646 1710 aa23.53■■□□□ 1.36
NECTIN1-205ENST00000524510 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
NECTIN1-205ENST00000524510 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
NECTIN1-205ENST00000524510 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
NECTIN1-205ENST00000524510 SYNJ2O15056 1496 aa23.44■■□□□ 1.34
NECTIN1-205ENST00000524510 ARAP1Q96P48 1450 aa23.44■■□□□ 1.34
NECTIN1-205ENST00000524510 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
NECTIN1-205ENST00000524510 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
NECTIN1-205ENST00000524510 SYNJ1O43426 1573 aa23.38■■□□□ 1.33
NECTIN1-205ENST00000524510 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
NECTIN1-205ENST00000524510 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
NECTIN1-205ENST00000524510 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
NECTIN1-205ENST00000524510 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
NECTIN1-205ENST00000524510 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
NECTIN1-205ENST00000524510 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
NECTIN1-205ENST00000524510 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
NECTIN1-205ENST00000524510 NUP160Q12769 1436 aa23.16■■□□□ 1.3
NECTIN1-205ENST00000524510 ADAMTS12P58397 1594 aa23.14■■□□□ 1.3
NECTIN1-205ENST00000524510 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
NECTIN1-205ENST00000524510 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
NECTIN1-205ENST00000524510 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
NECTIN1-205ENST00000524510 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
NECTIN1-205ENST00000524510 IGF1RP08069 1367 aa22.96■■□□□ 1.27
NECTIN1-205ENST00000524510 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
NECTIN1-205ENST00000524510 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
NECTIN1-205ENST00000524510 KIF27Q86VH2 1401 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms