RNA–Protein interactions for RNA: ENST00000524383.1
Retrieved 8 of 8 RNA–protein pairs in 6 ms
ABCA7-204, Transcript of ATP binding cassette subfamily A member 7, human
TSL 3
Gene ABCA7, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA7-204 | ENST00000524383 | PPIG | Q13427 | 754 aa | Known RBP eCLIP | 23.52 | ■■□□□ 1.36 | 1e-14 | ■■■■■ 41.1 |
ABCA7-204 | ENST00000524383 | SF3A3 | Q12874 | 501 aa | Known RBP eCLIP | 18.2 | ■□□□□ 0.5 | 6e-12 | ■■■■■ 79.1 |
ABCA7-204 | ENST00000524383 | GTF2F1 | P35269 | 517 aa | Known RBP eCLIP | 22.62 | ■■□□□ 1.21 | 2e-11 | ■■■■□ 25.2 |
ABCA7-204 | ENST00000524383 | AQR | O60306 | 1485 aa | Known RBP eCLIP | 36.38 | ■■■■□ 3.41 | 6e-10 | ■■■■■ 53.7 |
ABCA7-204 | ENST00000524383 | PCBP2 | Q15366 | 365 aa | Known RBP eCLIP | 19.15 | ■□□□□ 0.66 | 3e-8 | ■■■■■ 34.3 |
ABCA7-204 | ENST00000524383 | PRPF4 | O43172 | 522 aa | Known RBP eCLIP | 19.31 | ■□□□□ 0.68 | 5e-8 | ■■■□□ 17.2 |
ABCA7-204 | ENST00000524383 | PABPN1 | Q86U42 | 306 aa | Known RBP eCLIP | 41.89 | ■■■■■ 4.3 | 1e-7 | ■■■■■ 28.6 |
ABCA7-204 | ENST00000524383 | PABPC4 | Q13310 | 644 aa | Known RBP eCLIP | 24.3 | ■■□□□ 1.48 | 2e-6 | ■■□□□ 11.4 |