RNA–Protein interactions for RNA: ENST00000523991.5

MDM2-222, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-222ENST00000523991 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
MDM2-222ENST00000523991 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
MDM2-222ENST00000523991 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
MDM2-222ENST00000523991 ABCC9O60706 1549 aa20.63■□□□□ 0.89
MDM2-222ENST00000523991 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
MDM2-222ENST00000523991 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
MDM2-222ENST00000523991 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
MDM2-222ENST00000523991 NACADO15069 1562 aa19.17■□□□□ 0.66
MDM2-222ENST00000523991 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
MDM2-222ENST00000523991 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
MDM2-222ENST00000523991 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
MDM2-222ENST00000523991 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
MDM2-222ENST00000523991 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
MDM2-222ENST00000523991 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
MDM2-222ENST00000523991 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
MDM2-222ENST00000523991 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
MDM2-222ENST00000523991 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
MDM2-222ENST00000523991 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
MDM2-222ENST00000523991 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
MDM2-222ENST00000523991 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
MDM2-222ENST00000523991 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
MDM2-222ENST00000523991 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
MDM2-222ENST00000523991 CUX2O14529 1486 aa18.03■□□□□ 0.48
MDM2-222ENST00000523991 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
MDM2-222ENST00000523991 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
MDM2-222ENST00000523991 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
MDM2-222ENST00000523991 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
MDM2-222ENST00000523991 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
MDM2-222ENST00000523991 NESP48681 1621 aa17.54■□□□□ 0.4
MDM2-222ENST00000523991 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
MDM2-222ENST00000523991 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
MDM2-222ENST00000523991 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
MDM2-222ENST00000523991 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
MDM2-222ENST00000523991 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
MDM2-222ENST00000523991 LAMC3Q9Y6N6 1575 aa17.39■□□□□ 0.37
MDM2-222ENST00000523991 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
MDM2-222ENST00000523991 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
MDM2-222ENST00000523991 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
MDM2-222ENST00000523991 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
MDM2-222ENST00000523991 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
MDM2-222ENST00000523991 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
MDM2-222ENST00000523991 WDR62O43379 1518 aa17.16■□□□□ 0.34
MDM2-222ENST00000523991 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
MDM2-222ENST00000523991 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
MDM2-222ENST00000523991 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
MDM2-222ENST00000523991 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
MDM2-222ENST00000523991 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
MDM2-222ENST00000523991 RIMBP3CA6NJZ7 1639 aa16.89■□□□□ 0.29
MDM2-222ENST00000523991 RIMBP3BA6NNM3 1639 aa16.89■□□□□ 0.29
MDM2-222ENST00000523991 RIMBP3Q9UFD9 1639 aa16.89■□□□□ 0.29
MDM2-222ENST00000523991 CFTRP13569 1480 aa16.83■□□□□ 0.28
MDM2-222ENST00000523991 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
MDM2-222ENST00000523991 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
MDM2-222ENST00000523991 WIZO95785 1651 aa16.8■□□□□ 0.28
MDM2-222ENST00000523991 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
MDM2-222ENST00000523991 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
MDM2-222ENST00000523991 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
MDM2-222ENST00000523991 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
MDM2-222ENST00000523991 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
MDM2-222ENST00000523991 FOXD1Q16676 465 aa16.61■□□□□ 0.25
MDM2-222ENST00000523991 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
MDM2-222ENST00000523991 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
MDM2-222ENST00000523991 EIF4G3O43432 1585 aaKnown RBP16.58■□□□□ 0.24
MDM2-222ENST00000523991 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
MDM2-222ENST00000523991 PRDM2Q13029 1718 aa16.55■□□□□ 0.24
MDM2-222ENST00000523991 ABCC8Q09428 1581 aa16.54■□□□□ 0.24
MDM2-222ENST00000523991 FBLN2P98095 1184 aa16.53■□□□□ 0.24
MDM2-222ENST00000523991 CHD1O14646 1710 aa16.5■□□□□ 0.23
MDM2-222ENST00000523991 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.238e-7■■■■□ 20
MDM2-222ENST00000523991 DNMBPQ6XZF7 1577 aa16.46■□□□□ 0.23
MDM2-222ENST00000523991 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
MDM2-222ENST00000523991 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
MDM2-222ENST00000523991 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
MDM2-222ENST00000523991 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
MDM2-222ENST00000523991 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
MDM2-222ENST00000523991 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
MDM2-222ENST00000523991 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
MDM2-222ENST00000523991 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
MDM2-222ENST00000523991 SOGA1O94964 1423 aa16.29■□□□□ 0.2
MDM2-222ENST00000523991 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
MDM2-222ENST00000523991 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
MDM2-222ENST00000523991 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
MDM2-222ENST00000523991 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
MDM2-222ENST00000523991 ADRA2BP18089 450 aa16.26■□□□□ 0.19
MDM2-222ENST00000523991 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
MDM2-222ENST00000523991 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
MDM2-222ENST00000523991 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
MDM2-222ENST00000523991 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
MDM2-222ENST00000523991 CUX1P39880 1505 aa16.06■□□□□ 0.16
MDM2-222ENST00000523991 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
MDM2-222ENST00000523991 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
MDM2-222ENST00000523991 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
MDM2-222ENST00000523991 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
MDM2-222ENST00000523991 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
MDM2-222ENST00000523991 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
MDM2-222ENST00000523991 NUP160Q12769 1436 aa15.95■□□□□ 0.14
MDM2-222ENST00000523991 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
MDM2-222ENST00000523991 KIF13AQ9H1H9 1805 aa15.92■□□□□ 0.14
MDM2-222ENST00000523991 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
MDM2-222ENST00000523991 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms