RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
SREK1-213ENST00000523655 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
SREK1-213ENST00000523655 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
SREK1-213ENST00000523655 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
SREK1-213ENST00000523655 FOXD1Q16676 465 aa21.86■■□□□ 1.09
SREK1-213ENST00000523655 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
SREK1-213ENST00000523655 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
SREK1-213ENST00000523655 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SREK1-213ENST00000523655 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
SREK1-213ENST00000523655 MSH5O43196 834 aa20.14■□□□□ 0.81
SREK1-213ENST00000523655 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
SREK1-213ENST00000523655 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
SREK1-213ENST00000523655 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
SREK1-213ENST00000523655 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
SREK1-213ENST00000523655 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
SREK1-213ENST00000523655 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
SREK1-213ENST00000523655 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
SREK1-213ENST00000523655 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
SREK1-213ENST00000523655 KCNA4P22459 653 aa18.01■□□□□ 0.47
SREK1-213ENST00000523655 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
SREK1-213ENST00000523655 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
SREK1-213ENST00000523655 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
SREK1-213ENST00000523655 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
SREK1-213ENST00000523655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
SREK1-213ENST00000523655 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
SREK1-213ENST00000523655 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
SREK1-213ENST00000523655 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
SREK1-213ENST00000523655 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
SREK1-213ENST00000523655 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
SREK1-213ENST00000523655 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
SREK1-213ENST00000523655 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SREK1-213ENST00000523655 ZBTB22O15209 634 aa16.61■□□□□ 0.25
SREK1-213ENST00000523655 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
SREK1-213ENST00000523655 CAPN15O75808 1086 aa16.56■□□□□ 0.24
SREK1-213ENST00000523655 MYCNP04198 464 aaPredicted RBP16.5■□□□□ 0.23
SREK1-213ENST00000523655 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
SREK1-213ENST00000523655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
SREK1-213ENST00000523655 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
SREK1-213ENST00000523655 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
SREK1-213ENST00000523655 DSG3P32926 999 aa16.36■□□□□ 0.21
SREK1-213ENST00000523655 ABCB7O75027 752 aa16.3■□□□□ 0.2
SREK1-213ENST00000523655 APLP2Q06481 763 aa16.3■□□□□ 0.2
SREK1-213ENST00000523655 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
SREK1-213ENST00000523655 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
SREK1-213ENST00000523655 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
SREK1-213ENST00000523655 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
SREK1-213ENST00000523655 POLA2Q14181 598 aa16.05■□□□□ 0.16
SREK1-213ENST00000523655 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
SREK1-213ENST00000523655 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
SREK1-213ENST00000523655 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
SREK1-213ENST00000523655 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
SREK1-213ENST00000523655 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
SREK1-213ENST00000523655 FBLN2P98095 1184 aa15.42■□□□□ 0.06
SREK1-213ENST00000523655 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
SREK1-213ENST00000523655 SPDYE2BA6NHP3 402 aa15.18■□□□□ 0.02
SREK1-213ENST00000523655 SPDYE6P0CI01 402 aa15.18■□□□□ 0.02
SREK1-213ENST00000523655 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
SREK1-213ENST00000523655 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SREK1-213ENST00000523655 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
SREK1-213ENST00000523655 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
SREK1-213ENST00000523655 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
SREK1-213ENST00000523655 POTEHQ6S545 545 aa15.06■□□□□ 0
SREK1-213ENST00000523655 PITPNM1O00562 1244 aa15.04■□□□□ -0
SREK1-213ENST00000523655 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
SREK1-213ENST00000523655 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
SREK1-213ENST00000523655 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
SREK1-213ENST00000523655 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
SREK1-213ENST00000523655 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
SREK1-213ENST00000523655 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
SREK1-213ENST00000523655 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
SREK1-213ENST00000523655 CHADLQ6NUI6 762 aa14.65□□□□□ -0.06
SREK1-213ENST00000523655 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
SREK1-213ENST00000523655 FKBP8Q14318 412 aa14.61□□□□□ -0.07
SREK1-213ENST00000523655 PROM2Q8N271 834 aa14.55□□□□□ -0.08
SREK1-213ENST00000523655 HAX1O00165 279 aa14.47□□□□□ -0.09
SREK1-213ENST00000523655 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
SREK1-213ENST00000523655 EVX2Q03828 476 aa14.45□□□□□ -0.1
SREK1-213ENST00000523655 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
SREK1-213ENST00000523655 FARP1Q9Y4F1 1045 aaPredicted RBP14.36□□□□□ -0.11
SREK1-213ENST00000523655 C19orf67A6NJJ6 358 aa14.29□□□□□ -0.12
SREK1-213ENST00000523655 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
SREK1-213ENST00000523655 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
SREK1-213ENST00000523655 MIER1Q8N108 512 aa14.19□□□□□ -0.14
SREK1-213ENST00000523655 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
SREK1-213ENST00000523655 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
SREK1-213ENST00000523655 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
SREK1-213ENST00000523655 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
SREK1-213ENST00000523655 GABBR2O75899 941 aa14.03□□□□□ -0.16
SREK1-213ENST00000523655 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SREK1-213ENST00000523655 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
SREK1-213ENST00000523655 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
SREK1-213ENST00000523655 PHF12Q96QT6 1004 aa13.96□□□□□ -0.17
SREK1-213ENST00000523655 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
SREK1-213ENST00000523655 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
SREK1-213ENST00000523655 ZNF579Q8NAF0 562 aaKnown RBP13.93□□□□□ -0.18
SREK1-213ENST00000523655 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
SREK1-213ENST00000523655 NUBP1P53384 320 aa13.87□□□□□ -0.19
SREK1-213ENST00000523655 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
SREK1-213ENST00000523655 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
SREK1-213ENST00000523655 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms