RNA–Protein interactions for RNA: ENST00000523638.5

ZNF260-202, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF260, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-202ENST00000523638 NISCHQ9Y2I1 1504 aa14.35□□□□□ -0.11
ZNF260-202ENST00000523638 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
ZNF260-202ENST00000523638 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
ZNF260-202ENST00000523638 DCAF8L2P0C7V8 631 aa12.61□□□□□ -0.39
ZNF260-202ENST00000523638 MYT1Q01538 1121 aa12.56□□□□□ -0.4
ZNF260-202ENST00000523638 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
ZNF260-202ENST00000523638 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
ZNF260-202ENST00000523638 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
ZNF260-202ENST00000523638 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
ZNF260-202ENST00000523638 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
ZNF260-202ENST00000523638 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
ZNF260-202ENST00000523638 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
ZNF260-202ENST00000523638 NEFLP07196 543 aa11.92□□□□□ -0.5
ZNF260-202ENST00000523638 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
ZNF260-202ENST00000523638 ABCC9O60706 1549 aa11.88□□□□□ -0.51
ZNF260-202ENST00000523638 APLP2Q06481 763 aa11.86□□□□□ -0.51
ZNF260-202ENST00000523638 SHROOM4Q9ULL8 1493 aa11.86□□□□□ -0.51
ZNF260-202ENST00000523638 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
ZNF260-202ENST00000523638 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
ZNF260-202ENST00000523638 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
ZNF260-202ENST00000523638 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
ZNF260-202ENST00000523638 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
ZNF260-202ENST00000523638 NACADO15069 1562 aa11.6□□□□□ -0.55
ZNF260-202ENST00000523638 PCGF6Q9BYE7 350 aa11.57□□□□□ -0.56
ZNF260-202ENST00000523638 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
ZNF260-202ENST00000523638 RB1CC1Q8TDY2 1594 aa11.5□□□□□ -0.57
ZNF260-202ENST00000523638 SCRIBQ14160 1630 aa11.48□□□□□ -0.57
ZNF260-202ENST00000523638 CLSPNQ9HAW4 1339 aa11.46□□□□□ -0.58
ZNF260-202ENST00000523638 EIF5BO60841 1220 aaKnown RBP11.35□□□□□ -0.59
ZNF260-202ENST00000523638 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
ZNF260-202ENST00000523638 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
ZNF260-202ENST00000523638 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
ZNF260-202ENST00000523638 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.6
ZNF260-202ENST00000523638 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.61
ZNF260-202ENST00000523638 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
ZNF260-202ENST00000523638 CNGB1Q14028 1251 aaPredicted RBP11.24□□□□□ -0.61
ZNF260-202ENST00000523638 CECR2Q9BXF3 1484 aa11.2□□□□□ -0.62
ZNF260-202ENST00000523638 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
ZNF260-202ENST00000523638 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
ZNF260-202ENST00000523638 SLC4A1APQ9BWU0 796 aaKnown RBP11.18□□□□□ -0.62
ZNF260-202ENST00000523638 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
ZNF260-202ENST00000523638 ZBTB47Q9UFB7 747 aaPredicted RBP11.15□□□□□ -0.62
ZNF260-202ENST00000523638 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
ZNF260-202ENST00000523638 BCL11AQ9H165 835 aa11.11□□□□□ -0.63
ZNF260-202ENST00000523638 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
ZNF260-202ENST00000523638 BAZ1AQ9NRL2 1556 aaPredicted RBP11.07□□□□□ -0.64
ZNF260-202ENST00000523638 ANP32BQ92688 251 aaKnown RBP11.07□□□□□ -0.64
ZNF260-202ENST00000523638 CHIC1Q5VXU3 224 aa11.04□□□□□ -0.64
ZNF260-202ENST00000523638 CDK11BP21127 795 aaKnown RBP11.02□□□□□ -0.65
ZNF260-202ENST00000523638 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
ZNF260-202ENST00000523638 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
ZNF260-202ENST00000523638 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
ZNF260-202ENST00000523638 WIZO95785 1651 aa10.97□□□□□ -0.65
ZNF260-202ENST00000523638 HRCP23327 699 aa10.89□□□□□ -0.67
ZNF260-202ENST00000523638 BCANQ96GW7 911 aa10.88□□□□□ -0.67
ZNF260-202ENST00000523638 TNNT2P45379 298 aaPredicted RBP10.86□□□□□ -0.67
ZNF260-202ENST00000523638 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
ZNF260-202ENST00000523638 HSP90AA1P07900 732 aaKnown RBP10.85□□□□□ -0.67
ZNF260-202ENST00000523638 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
ZNF260-202ENST00000523638 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
ZNF260-202ENST00000523638 UBTFP17480 764 aaKnown RBP10.83□□□□□ -0.68
ZNF260-202ENST00000523638 CANXP27824 592 aaKnown RBP10.83□□□□□ -0.68
ZNF260-202ENST00000523638 PEG3Q9GZU2 1588 aa10.83□□□□□ -0.68
ZNF260-202ENST00000523638 GTF3C3Q9Y5Q9 886 aa10.83□□□□□ -0.68
ZNF260-202ENST00000523638 SMARCA2P51531 1590 aa10.81□□□□□ -0.68
ZNF260-202ENST00000523638 ITGAEP38570 1179 aa10.8□□□□□ -0.68
ZNF260-202ENST00000523638 ANP32AP39687 249 aaKnown RBP10.8□□□□□ -0.68
ZNF260-202ENST00000523638 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
ZNF260-202ENST00000523638 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
ZNF260-202ENST00000523638 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
ZNF260-202ENST00000523638 ARXQ96QS3 562 aa10.79□□□□□ -0.68
ZNF260-202ENST00000523638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.78□□□□□ -0.68
ZNF260-202ENST00000523638 HNRNPUL2Q1KMD3 747 aaKnown RBP10.78□□□□□ -0.68
ZNF260-202ENST00000523638 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
ZNF260-202ENST00000523638 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
ZNF260-202ENST00000523638 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
ZNF260-202ENST00000523638 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
ZNF260-202ENST00000523638 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
ZNF260-202ENST00000523638 NEFMP07197 916 aa10.69□□□□□ -0.7
ZNF260-202ENST00000523638 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
ZNF260-202ENST00000523638 CC2D2AQ9P2K1 1620 aa10.65□□□□□ -0.7
ZNF260-202ENST00000523638 TULP1O00294 542 aaPredicted RBP10.65□□□□□ -0.7
ZNF260-202ENST00000523638 UPF2Q9HAU5 1272 aaKnown RBP10.63□□□□□ -0.71
ZNF260-202ENST00000523638 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
ZNF260-202ENST00000523638 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
ZNF260-202ENST00000523638 DIEXFQ68CQ4 756 aaKnown RBP10.57□□□□□ -0.72
ZNF260-202ENST00000523638 NBR1Q14596 966 aa10.56□□□□□ -0.72
ZNF260-202ENST00000523638 LOC105371045A0A1W2PR82 267 aa10.56□□□□□ -0.72
ZNF260-202ENST00000523638 DNTTIP2Q5QJE6 756 aaKnown RBP10.55□□□□□ -0.72
ZNF260-202ENST00000523638 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
ZNF260-202ENST00000523638 WRNQ14191 1432 aaPredicted RBP eCLIP10.54□□□□□ -0.72
ZNF260-202ENST00000523638 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
ZNF260-202ENST00000523638 CFTRP13569 1480 aa10.53□□□□□ -0.72
ZNF260-202ENST00000523638 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.72
ZNF260-202ENST00000523638 CADPSQ9ULU8 1353 aa10.52□□□□□ -0.72
ZNF260-202ENST00000523638 PTMAP06454 111 aaKnown RBP10.51□□□□□ -0.73
ZNF260-202ENST00000523638 ZRSR1Q15695 479 aaKnown RBP10.49□□□□□ -0.73
ZNF260-202ENST00000523638 TRIM26Q12899 539 aaPredicted RBP10.49□□□□□ -0.73
ZNF260-202ENST00000523638 ZNF326Q5BKZ1 582 aaKnown RBP10.49□□□□□ -0.73
ZNF260-202ENST00000523638 PRM3Q9NNZ6 103 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms