RNA–Protein interactions for RNA: ENST00000523336.1

AF279873.3-204, humanhuman

TSL 2 BASIC

Gene AF279873.3, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF279873.3-204ENST00000523336 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
AF279873.3-204ENST00000523336 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
AF279873.3-204ENST00000523336 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
AF279873.3-204ENST00000523336 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
AF279873.3-204ENST00000523336 FOXD1Q16676 465 aa19.03■□□□□ 0.64
AF279873.3-204ENST00000523336 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
AF279873.3-204ENST00000523336 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
AF279873.3-204ENST00000523336 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
AF279873.3-204ENST00000523336 ADRA2BP18089 450 aa17.64■□□□□ 0.41
AF279873.3-204ENST00000523336 MSH5O43196 834 aa17.62■□□□□ 0.41
AF279873.3-204ENST00000523336 PIAS4Q8N2W9 510 aaPredicted RBP17.62■□□□□ 0.41
AF279873.3-204ENST00000523336 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
AF279873.3-204ENST00000523336 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
AF279873.3-204ENST00000523336 DMRT2Q9Y5R5 561 aa16.09■□□□□ 0.17
AF279873.3-204ENST00000523336 CCDC180Q9P1Z9 1646 aa15.9■□□□□ 0.14
AF279873.3-204ENST00000523336 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
AF279873.3-204ENST00000523336 ABCC9O60706 1549 aa15.73■□□□□ 0.11
AF279873.3-204ENST00000523336 PPP4R3CPQ6ZMV5 832 aa15.67■□□□□ 0.1
AF279873.3-204ENST00000523336 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
AF279873.3-204ENST00000523336 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
AF279873.3-204ENST00000523336 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.04
AF279873.3-204ENST00000523336 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
AF279873.3-204ENST00000523336 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
AF279873.3-204ENST00000523336 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
AF279873.3-204ENST00000523336 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
AF279873.3-204ENST00000523336 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
AF279873.3-204ENST00000523336 ZCCHC6Q5VYS8 1495 aaKnown RBP14.95□□□□□ -0.02
AF279873.3-204ENST00000523336 NACADO15069 1562 aa14.93□□□□□ -0.02
AF279873.3-204ENST00000523336 RB1CC1Q8TDY2 1594 aa14.92□□□□□ -0.02
AF279873.3-204ENST00000523336 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
AF279873.3-204ENST00000523336 MYO15BQ96JP2 1530 aa14.85□□□□□ -0.03
AF279873.3-204ENST00000523336 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
AF279873.3-204ENST00000523336 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
AF279873.3-204ENST00000523336 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
AF279873.3-204ENST00000523336 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
AF279873.3-204ENST00000523336 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
AF279873.3-204ENST00000523336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.57□□□□□ -0.08
AF279873.3-204ENST00000523336 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
AF279873.3-204ENST00000523336 KCNA4P22459 653 aa14.53□□□□□ -0.08
AF279873.3-204ENST00000523336 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
AF279873.3-204ENST00000523336 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
AF279873.3-204ENST00000523336 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
AF279873.3-204ENST00000523336 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
AF279873.3-204ENST00000523336 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.12
AF279873.3-204ENST00000523336 DSG3P32926 999 aa14.18□□□□□ -0.14
AF279873.3-204ENST00000523336 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
AF279873.3-204ENST00000523336 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
AF279873.3-204ENST00000523336 CAPN15O75808 1086 aa14.08□□□□□ -0.16
AF279873.3-204ENST00000523336 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
AF279873.3-204ENST00000523336 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
AF279873.3-204ENST00000523336 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
AF279873.3-204ENST00000523336 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
AF279873.3-204ENST00000523336 ABCB7O75027 752 aa13.88□□□□□ -0.19
AF279873.3-204ENST00000523336 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
AF279873.3-204ENST00000523336 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
AF279873.3-204ENST00000523336 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
AF279873.3-204ENST00000523336 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
AF279873.3-204ENST00000523336 SMARCA2P51531 1590 aa13.78□□□□□ -0.2
AF279873.3-204ENST00000523336 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
AF279873.3-204ENST00000523336 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
AF279873.3-204ENST00000523336 WIZO95785 1651 aa13.72□□□□□ -0.21
AF279873.3-204ENST00000523336 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
AF279873.3-204ENST00000523336 POTEHQ6S545 545 aa13.7□□□□□ -0.22
AF279873.3-204ENST00000523336 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
AF279873.3-204ENST00000523336 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
AF279873.3-204ENST00000523336 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
AF279873.3-204ENST00000523336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
AF279873.3-204ENST00000523336 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
AF279873.3-204ENST00000523336 MYCNP04198 464 aaPredicted RBP13.62□□□□□ -0.23
AF279873.3-204ENST00000523336 APLP2Q06481 763 aa13.62□□□□□ -0.23
AF279873.3-204ENST00000523336 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
AF279873.3-204ENST00000523336 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
AF279873.3-204ENST00000523336 CUX2O14529 1486 aa13.54□□□□□ -0.24
AF279873.3-204ENST00000523336 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
AF279873.3-204ENST00000523336 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
AF279873.3-204ENST00000523336 ZBTB22O15209 634 aa13.5□□□□□ -0.25
AF279873.3-204ENST00000523336 POLA2Q14181 598 aa13.5□□□□□ -0.25
AF279873.3-204ENST00000523336 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
AF279873.3-204ENST00000523336 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
AF279873.3-204ENST00000523336 NESP48681 1621 aa13.49□□□□□ -0.25
AF279873.3-204ENST00000523336 FOXD4L1Q9NU39 408 aa13.46□□□□□ -0.25
AF279873.3-204ENST00000523336 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
AF279873.3-204ENST00000523336 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
AF279873.3-204ENST00000523336 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
AF279873.3-204ENST00000523336 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
AF279873.3-204ENST00000523336 CFTRP13569 1480 aa13.31□□□□□ -0.28
AF279873.3-204ENST00000523336 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
AF279873.3-204ENST00000523336 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
AF279873.3-204ENST00000523336 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
AF279873.3-204ENST00000523336 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
AF279873.3-204ENST00000523336 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
AF279873.3-204ENST00000523336 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
AF279873.3-204ENST00000523336 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
AF279873.3-204ENST00000523336 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
AF279873.3-204ENST00000523336 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
AF279873.3-204ENST00000523336 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
AF279873.3-204ENST00000523336 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
AF279873.3-204ENST00000523336 WDR62O43379 1518 aa13.09□□□□□ -0.31
AF279873.3-204ENST00000523336 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
AF279873.3-204ENST00000523336 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms