RNA–Protein interactions for RNA: ENST00000523105.5

IKBKB-227, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-227ENST00000523105 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.361e-91■■■■■ 230.9
IKBKB-227ENST00000523105 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.46□□□□□ -0.252e-14■■■■■ 51.9
IKBKB-227ENST00000523105 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.55□□□□□ -0.245e-12■■■■■ 104.3
IKBKB-227ENST00000523105 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.346e-10■■■■■ 39
IKBKB-227ENST00000523105 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.264e-9■■■■■ 126.2
IKBKB-227ENST00000523105 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.031e-8■■■■■ 32.6
IKBKB-227ENST00000523105 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.242e-8■■■□□ 17
IKBKB-227ENST00000523105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.214e-8■■□□□ 13.4
IKBKB-227ENST00000523105 DDX21Q9NR30 783 aaKnown RBP eCLIP15.81■□□□□ 0.121e-7■■■■■ 31
IKBKB-227ENST00000523105 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■□□□ 13.4
IKBKB-227ENST00000523105 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.87■□□□□ 0.452e-7■■■■■ 44.1
IKBKB-227ENST00000523105 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.232e-7■■■□□ 18.1
IKBKB-227ENST00000523105 PCBP2Q15366 365 aaKnown RBP eCLIP12.35□□□□□ -0.432e-7■■■■□ 26
IKBKB-227ENST00000523105 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.273e-7■■■□□ 17.9
IKBKB-227ENST00000523105 HNRNPMP52272 730 aaKnown RBP eCLIP18.84■□□□□ 0.613e-7■■■■□ 24.6
IKBKB-227ENST00000523105 SF3A3Q12874 501 aaKnown RBP eCLIP13.01□□□□□ -0.334e-7■■□□□ 14.3
IKBKB-227ENST00000523105 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.15□□□□□ -0.785e-7■■□□□ 14.3
IKBKB-227ENST00000523105 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.175e-7■■■□□ 15.2
IKBKB-227ENST00000523105 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.676e-7■■□□□ 12.4
IKBKB-227ENST00000523105 U2AF2P26368 475 aaKnown RBP eCLIP14.47□□□□□ -0.098e-7■■■■■ 33.4
IKBKB-227ENST00000523105 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■□□□ 12.8
IKBKB-227ENST00000523105 SF3B4Q15427 424 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■■■ 50.5
IKBKB-227ENST00000523105 GPKOWQ92917 476 aaPredicted RBP eCLIP14.18□□□□□ -0.142e-6■■■■■ 37.1
IKBKB-227ENST00000523105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■□□□ 12.3
IKBKB-227ENST00000523105 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■□□ 15
IKBKB-227ENST00000523105 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■□□□ 11.9
IKBKB-227ENST00000523105 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.93□□□□□ -0.023e-6■■■■□ 24.2
IKBKB-227ENST00000523105 SF3B1O75533 1304 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■■■■■ 108.7
IKBKB-227ENST00000523105 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.916e-6■■■■□ 25.1
IKBKB-227ENST00000523105 TIA1P31483 386 aaKnown RBP eCLIP12.05□□□□□ -0.489e-6■□□□□ 9.6
Retrieved 30 of 30 RNA–protein pairs in 6.8 ms