RNA–Protein interactions for RNA: ENST00000523067.5

PTK2-242, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-242ENST00000523067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.53□□□□□ -1.047e-22■■■■■ 30.4
PTK2-242ENST00000523067 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.34□□□□□ -0.912e-21■■□□□ 12.2
PTK2-242ENST00000523067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.534e-14■■□□□ 14.2
PTK2-242ENST00000523067 DDX3XO00571 662 aaKnown RBP eCLIP8.01□□□□□ -1.136e-14■■■■□ 21.8
PTK2-242ENST00000523067 PTBP1P26599 531 aaKnown RBP eCLIP6.1□□□□□ -1.434e-11■■■■■ 42
PTK2-242ENST00000523067 FXR2P51116 673 aaKnown RBP eCLIP9.29□□□□□ -0.922e-10■■□□□ 12.3
PTK2-242ENST00000523067 NKRFO15226 690 aaKnown RBP eCLIP8.82□□□□□ -12e-10■■■□□ 14.6
PTK2-242ENST00000523067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.4□□□□□ -1.383e-10■■■■■ 34
PTK2-242ENST00000523067 YBX3P16989 372 aaKnown RBP eCLIP9.77□□□□□ -0.854e-9■■□□□ 11.5
PTK2-242ENST00000523067 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.21□□□□□ -1.14e-9■■■■■ 36.3
PTK2-242ENST00000523067 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.16□□□□□ -1.267e-9■■■■□ 20.2
PTK2-242ENST00000523067 MATR3P43243 847 aaKnown RBP eCLIP8.43□□□□□ -1.062e-8■■■■■ 29.6
PTK2-242ENST00000523067 SLBPQ14493 270 aaKnown RBP eCLIP7.33□□□□□ -1.243e-8■■■■■ 184.8
PTK2-242ENST00000523067 QKIQ96PU8 341 aaKnown RBP eCLIP7.76□□□□□ -1.173e-8■■■■■ 56.7
PTK2-242ENST00000523067 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.124e-8■■■■□ 23.4
PTK2-242ENST00000523067 NONOQ15233 471 aaKnown RBP eCLIP8.77□□□□□ -1.015e-8■■□□□ 11.4
PTK2-242ENST00000523067 ILF3Q12906 894 aaKnown RBP eCLIP7.63□□□□□ -1.197e-8■■□□□ 12.2
PTK2-242ENST00000523067 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.01□□□□□ -1.297e-8■■■□□ 15.2
PTK2-242ENST00000523067 HNRNPKP61978 463 aaKnown RBP eCLIP7.68□□□□□ -1.187e-8■■□□□ 14.5
PTK2-242ENST00000523067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.757e-8■■■■□ 19.4
PTK2-242ENST00000523067 AATFQ9NY61 560 aaKnown RBP eCLIP9.31□□□□□ -0.921e-7■■■■■ 52.1
PTK2-242ENST00000523067 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.95□□□□□ -1.142e-7■■□□□ 13.8
PTK2-242ENST00000523067 PRPF4O43172 522 aaKnown RBP eCLIP7.33□□□□□ -1.242e-7■■■■■ 32.7
PTK2-242ENST00000523067 SRSF9Q13242 221 aaKnown RBP eCLIP4.75□□□□□ -1.652e-7■■□□□ 13.7
PTK2-242ENST00000523067 TIA1P31483 386 aaKnown RBP eCLIP7.2□□□□□ -1.262e-7■□□□□ 10
PTK2-242ENST00000523067 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.89□□□□□ -0.993e-7■■■■■ 34.8
PTK2-242ENST00000523067 U2AF2P26368 475 aaKnown RBP eCLIP8.72□□□□□ -1.013e-7■■□□□ 13.7
PTK2-242ENST00000523067 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.083e-7■■■■■ 36
PTK2-242ENST00000523067 SF3B1O75533 1304 aaKnown RBP eCLIP8.34□□□□□ -1.073e-7■■■■■ 43.2
PTK2-242ENST00000523067 HNRNPLP14866 589 aaKnown RBP eCLIP7.94□□□□□ -1.144e-7■■□□□ 12.5
PTK2-242ENST00000523067 SFPQP23246 707 aaKnown RBP eCLIP8.53□□□□□ -1.045e-7■■□□□ 14.5
PTK2-242ENST00000523067 PCBP2Q15366 365 aaKnown RBP eCLIP7.35□□□□□ -1.236e-7■■■■■ 35.5
PTK2-242ENST00000523067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.07□□□□□ -1.127e-7■□□□□ 8.5
PTK2-242ENST00000523067 HNRNPCP07910 306 aaKnown RBP eCLIP5.79□□□□□ -1.487e-7■□□□□ 9.8
PTK2-242ENST00000523067 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.59□□□□□ -1.357e-7■■■■□ 24.7
PTK2-242ENST00000523067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.62□□□□□ -0.558e-7■■□□□ 14
PTK2-242ENST00000523067 XRCC6P12956 609 aaKnown RBP eCLIP8.64□□□□□ -1.039e-7■■■■■ 34.5
PTK2-242ENST00000523067 EWSR1Q01844 656 aaKnown RBP eCLIP5.76□□□□□ -1.491e-6■■■■■ 26.8
PTK2-242ENST00000523067 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.991e-6■■□□□ 14.5
PTK2-242ENST00000523067 HNRNPMP52272 730 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■□ 23.4
PTK2-242ENST00000523067 EIF4G2P78344 907 aaKnown RBP eCLIP10.81□□□□□ -0.681e-6■■■■□ 21.9
PTK2-242ENST00000523067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.72e-6■■■□□ 18.4
PTK2-242ENST00000523067 EFTUD2Q15029 972 aaKnown RBP eCLIP7.42□□□□□ -1.222e-6■■□□□ 13.7
PTK2-242ENST00000523067 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.61□□□□□ -1.192e-6■■■■■ 67.2
PTK2-242ENST00000523067 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.23□□□□□ -1.412e-6■■■■■ 36.1
PTK2-242ENST00000523067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.482e-6■■□□□ 11.5
PTK2-242ENST00000523067 KHSRPQ92945 711 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■□□ 15.7
PTK2-242ENST00000523067 AQRO60306 1485 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■■□ 24.7
PTK2-242ENST00000523067 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.48□□□□□ -1.213e-6■■■■■ 50.8
PTK2-242ENST00000523067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.22□□□□□ -1.093e-6■■■■■ 88
PTK2-242ENST00000523067 TARDBPQ13148 414 aaKnown RBP eCLIP7.53□□□□□ -1.24e-6■■■■□ 21
PTK2-242ENST00000523067 FMR1Q06787 632 aaKnown RBP eCLIP9.36□□□□□ -0.914e-6■■□□□ 11.8
PTK2-242ENST00000523067 RBM22Q9NW64 420 aaKnown RBP eCLIP7.81□□□□□ -1.167e-6■■■■□ 24.6
PTK2-242ENST00000523067 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.28e-6■■■■□ 21.3
PTK2-242ENST00000523067 DKC1O60832 514 aaKnown RBP eCLIP8.67□□□□□ -1.021e-5■■■■□ 25.7
PTK2-242ENST00000523067 PUS1Q9Y606 427 aaKnown RBP eCLIP5.83□□□□□ -1.481e-5■■■■■ 49.7
Retrieved 56 of 56 RNA–protein pairs in 47.9 ms