RNA–Protein interactions for RNA: ENST00000522833.5

GTF2E2-204, Transcript of general transcription factor IIE subunit 2, humanhuman

TSL 3

Gene GTF2E2, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E2-204ENST00000522833 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
GTF2E2-204ENST00000522833 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
GTF2E2-204ENST00000522833 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.01
GTF2E2-204ENST00000522833 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
GTF2E2-204ENST00000522833 ABCC9O60706 1549 aa19.78■□□□□ 0.76
GTF2E2-204ENST00000522833 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
GTF2E2-204ENST00000522833 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
GTF2E2-204ENST00000522833 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
GTF2E2-204ENST00000522833 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
GTF2E2-204ENST00000522833 NACADO15069 1562 aa18.51■□□□□ 0.55
GTF2E2-204ENST00000522833 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
GTF2E2-204ENST00000522833 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
GTF2E2-204ENST00000522833 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
GTF2E2-204ENST00000522833 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
GTF2E2-204ENST00000522833 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
GTF2E2-204ENST00000522833 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
GTF2E2-204ENST00000522833 FOXD1Q16676 465 aa18.09■□□□□ 0.49
GTF2E2-204ENST00000522833 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
GTF2E2-204ENST00000522833 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
GTF2E2-204ENST00000522833 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
GTF2E2-204ENST00000522833 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
GTF2E2-204ENST00000522833 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
GTF2E2-204ENST00000522833 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
GTF2E2-204ENST00000522833 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
GTF2E2-204ENST00000522833 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
GTF2E2-204ENST00000522833 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
GTF2E2-204ENST00000522833 ADRA2BP18089 450 aa17.36■□□□□ 0.37
GTF2E2-204ENST00000522833 CUX2O14529 1486 aa17.36■□□□□ 0.37
GTF2E2-204ENST00000522833 MSH5O43196 834 aa17.23■□□□□ 0.35
GTF2E2-204ENST00000522833 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
GTF2E2-204ENST00000522833 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
GTF2E2-204ENST00000522833 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
GTF2E2-204ENST00000522833 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
GTF2E2-204ENST00000522833 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
GTF2E2-204ENST00000522833 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
GTF2E2-204ENST00000522833 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
GTF2E2-204ENST00000522833 NESP48681 1621 aa16.83■□□□□ 0.28
GTF2E2-204ENST00000522833 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
GTF2E2-204ENST00000522833 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
GTF2E2-204ENST00000522833 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
GTF2E2-204ENST00000522833 TRIM41Q8WV44 630 aa16.74■□□□□ 0.27
GTF2E2-204ENST00000522833 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
GTF2E2-204ENST00000522833 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
GTF2E2-204ENST00000522833 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
GTF2E2-204ENST00000522833 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
GTF2E2-204ENST00000522833 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
GTF2E2-204ENST00000522833 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
GTF2E2-204ENST00000522833 WDR62O43379 1518 aa16.53■□□□□ 0.24
GTF2E2-204ENST00000522833 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
GTF2E2-204ENST00000522833 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
GTF2E2-204ENST00000522833 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
GTF2E2-204ENST00000522833 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
GTF2E2-204ENST00000522833 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
GTF2E2-204ENST00000522833 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
GTF2E2-204ENST00000522833 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
GTF2E2-204ENST00000522833 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
GTF2E2-204ENST00000522833 CFTRP13569 1480 aa16.22■□□□□ 0.19
GTF2E2-204ENST00000522833 WIZO95785 1651 aa16.2■□□□□ 0.18
GTF2E2-204ENST00000522833 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
GTF2E2-204ENST00000522833 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
GTF2E2-204ENST00000522833 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
GTF2E2-204ENST00000522833 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
GTF2E2-204ENST00000522833 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
GTF2E2-204ENST00000522833 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
GTF2E2-204ENST00000522833 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
GTF2E2-204ENST00000522833 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
GTF2E2-204ENST00000522833 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
GTF2E2-204ENST00000522833 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
GTF2E2-204ENST00000522833 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
GTF2E2-204ENST00000522833 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
GTF2E2-204ENST00000522833 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
GTF2E2-204ENST00000522833 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
GTF2E2-204ENST00000522833 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
GTF2E2-204ENST00000522833 CHD1O14646 1710 aa15.92■□□□□ 0.14
GTF2E2-204ENST00000522833 KCNA4P22459 653 aa15.91■□□□□ 0.14
GTF2E2-204ENST00000522833 DNMBPQ6XZF7 1577 aa15.88■□□□□ 0.13
GTF2E2-204ENST00000522833 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
GTF2E2-204ENST00000522833 AQRO60306 1485 aaKnown RBP eCLIP15.81■□□□□ 0.12
GTF2E2-204ENST00000522833 FBLN2P98095 1184 aa15.8■□□□□ 0.12
GTF2E2-204ENST00000522833 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
GTF2E2-204ENST00000522833 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
GTF2E2-204ENST00000522833 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
GTF2E2-204ENST00000522833 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
GTF2E2-204ENST00000522833 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
GTF2E2-204ENST00000522833 CLASP1Q7Z460 1538 aa15.75■□□□□ 0.11
GTF2E2-204ENST00000522833 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
GTF2E2-204ENST00000522833 SNAPC4Q5SXM2 1469 aa15.7■□□□□ 0.1
GTF2E2-204ENST00000522833 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
GTF2E2-204ENST00000522833 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
GTF2E2-204ENST00000522833 SOGA1O94964 1423 aa15.66■□□□□ 0.1
GTF2E2-204ENST00000522833 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
GTF2E2-204ENST00000522833 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
GTF2E2-204ENST00000522833 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
GTF2E2-204ENST00000522833 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
GTF2E2-204ENST00000522833 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
GTF2E2-204ENST00000522833 GAPVD1Q14C86 1478 aa15.61■□□□□ 0.09
GTF2E2-204ENST00000522833 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
GTF2E2-204ENST00000522833 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
GTF2E2-204ENST00000522833 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
GTF2E2-204ENST00000522833 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms