RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 NISCHQ9Y2I1 1504 aa45.13■■■■■ 4.82
TOP1MT-215ENST00000522043 CCDC180Q9P1Z9 1646 aa40.38■■■■■ 4.05
TOP1MT-215ENST00000522043 ABCC9O60706 1549 aa40.06■■■■■ 4
TOP1MT-215ENST00000522043 RB1CC1Q8TDY2 1594 aa38.24■■■■□ 3.71
TOP1MT-215ENST00000522043 NACADO15069 1562 aa38.06■■■■□ 3.68
TOP1MT-215ENST00000522043 DCAF8L2P0C7V8 631 aa37.83■■■■□ 3.65
TOP1MT-215ENST00000522043 MYO15BQ96JP2 1530 aa37.65■■■■□ 3.62
TOP1MT-215ENST00000522043 UNC13AQ9UPW8 1703 aa37.53■■■■□ 3.6
TOP1MT-215ENST00000522043 ZCCHC6Q5VYS8 1495 aaKnown RBP37.48■■■■□ 3.59
TOP1MT-215ENST00000522043 DNAJC5BQ9UF47 199 aa37.38■■■■□ 3.57
TOP1MT-215ENST00000522043 PABPN1Q86U42 306 aaKnown RBP eCLIP37.33■■■■□ 3.57
TOP1MT-215ENST00000522043 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
TOP1MT-215ENST00000522043 BICRAQ9NZM4 1560 aa37.24■■■■□ 3.55
TOP1MT-215ENST00000522043 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
TOP1MT-215ENST00000522043 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
TOP1MT-215ENST00000522043 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
TOP1MT-215ENST00000522043 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
TOP1MT-215ENST00000522043 CECR2Q9BXF3 1484 aa36.04■■■■□ 3.36
TOP1MT-215ENST00000522043 SMARCA4P51532 1647 aa35.16■■■■□ 3.22
TOP1MT-215ENST00000522043 NCAPD3P42695 1498 aa35.15■■■■□ 3.22
TOP1MT-215ENST00000522043 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
TOP1MT-215ENST00000522043 BAZ1AQ9NRL2 1556 aaPredicted RBP34.98■■■■□ 3.19
TOP1MT-215ENST00000522043 SMARCA2P51531 1590 aa34.96■■■■□ 3.19
TOP1MT-215ENST00000522043 HMGXB3Q12766 1538 aa34.92■■■■□ 3.18
TOP1MT-215ENST00000522043 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
TOP1MT-215ENST00000522043 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
TOP1MT-215ENST00000522043 BAZ1BQ9UIG0 1483 aaKnown RBP34.73■■■■□ 3.15
TOP1MT-215ENST00000522043 NESP48681 1621 aa34.55■■■■□ 3.12
TOP1MT-215ENST00000522043 ERCC6Q03468 1493 aa34.49■■■■□ 3.11
TOP1MT-215ENST00000522043 WIZO95785 1651 aa34.42■■■■□ 3.1
TOP1MT-215ENST00000522043 CUX2O14529 1486 aa34.38■■■■□ 3.09
TOP1MT-215ENST00000522043 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
TOP1MT-215ENST00000522043 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
TOP1MT-215ENST00000522043 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
TOP1MT-215ENST00000522043 KIF21AQ7Z4S6 1674 aa34.14■■■■□ 3.06
TOP1MT-215ENST00000522043 CADPSQ9ULU8 1353 aa34.07■■■■□ 3.04
TOP1MT-215ENST00000522043 PDS5BQ9NTI5 1447 aa34.03■■■■□ 3.04
TOP1MT-215ENST00000522043 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
TOP1MT-215ENST00000522043 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
TOP1MT-215ENST00000522043 CFTRP13569 1480 aa33.77■■■■□ 3
TOP1MT-215ENST00000522043 MRC2Q9UBG0 1479 aa33.77■■■■□ 3
TOP1MT-215ENST00000522043 WDR62O43379 1518 aa33.73■■■□□ 2.99
TOP1MT-215ENST00000522043 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
TOP1MT-215ENST00000522043 CEP164Q9UPV0 1460 aa33.68■■■□□ 2.98
TOP1MT-215ENST00000522043 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.97
TOP1MT-215ENST00000522043 PRDM2Q13029 1718 aa33.52■■■□□ 2.96
TOP1MT-215ENST00000522043 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
TOP1MT-215ENST00000522043 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
TOP1MT-215ENST00000522043 DNMBPQ6XZF7 1577 aa33.01■■■□□ 2.88
TOP1MT-215ENST00000522043 IFT140Q96RY7 1462 aa32.99■■■□□ 2.87
TOP1MT-215ENST00000522043 ZNF608Q9ULD9 1512 aaPredicted RBP32.99■■■□□ 2.87
TOP1MT-215ENST00000522043 ABCC8Q09428 1581 aa32.97■■■□□ 2.87
TOP1MT-215ENST00000522043 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
TOP1MT-215ENST00000522043 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
TOP1MT-215ENST00000522043 POLA1P09884 1462 aaPredicted RBP32.8■■■□□ 2.84
TOP1MT-215ENST00000522043 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
TOP1MT-215ENST00000522043 SUPT5HO00267 1087 aaKnown RBP32.78■■■□□ 2.84
TOP1MT-215ENST00000522043 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.82
TOP1MT-215ENST00000522043 CUX1P39880 1505 aa32.69■■■□□ 2.82
TOP1MT-215ENST00000522043 RAD54L2Q9Y4B4 1467 aa32.68■■■□□ 2.82
TOP1MT-215ENST00000522043 FGD5Q6ZNL6 1462 aa32.63■■■□□ 2.81
TOP1MT-215ENST00000522043 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
TOP1MT-215ENST00000522043 SOGA1O94964 1423 aa32.6■■■□□ 2.81
TOP1MT-215ENST00000522043 CHD1O14646 1710 aa32.54■■■□□ 2.8
TOP1MT-215ENST00000522043 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
TOP1MT-215ENST00000522043 WDR97A6NE52 1622 aa32.47■■■□□ 2.79
TOP1MT-215ENST00000522043 RIMBP3CA6NJZ7 1639 aa32.47■■■□□ 2.79
TOP1MT-215ENST00000522043 RIMBP3BA6NNM3 1639 aa32.47■■■□□ 2.79
TOP1MT-215ENST00000522043 RIMBP3Q9UFD9 1639 aa32.47■■■□□ 2.79
TOP1MT-215ENST00000522043 SNAPC4Q5SXM2 1469 aa32.37■■■□□ 2.77
TOP1MT-215ENST00000522043 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
TOP1MT-215ENST00000522043 FBLN2P98095 1184 aa32.31■■■□□ 2.76
TOP1MT-215ENST00000522043 GRIN2BQ13224 1484 aa32.29■■■□□ 2.76
TOP1MT-215ENST00000522043 PBRM1Q86U86 1689 aa32.27■■■□□ 2.76
TOP1MT-215ENST00000522043 ABCA10Q8WWZ4 1543 aa32.27■■■□□ 2.76
TOP1MT-215ENST00000522043 MAGI1Q96QZ7 1491 aaPredicted RBP32.26■■■□□ 2.75
TOP1MT-215ENST00000522043 ABCA5Q8WWZ7 1642 aa32.25■■■□□ 2.75
TOP1MT-215ENST00000522043 BIVM-ERCC5R4GMW8 1640 aa32.25■■■□□ 2.75
TOP1MT-215ENST00000522043 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
TOP1MT-215ENST00000522043 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
TOP1MT-215ENST00000522043 TOP2BQ02880 1626 aa32.22■■■□□ 2.75
TOP1MT-215ENST00000522043 WRNQ14191 1432 aaPredicted RBP eCLIP32.17■■■□□ 2.74
TOP1MT-215ENST00000522043 CLASP1Q7Z460 1538 aa32.16■■■□□ 2.74
TOP1MT-215ENST00000522043 SYNJ2O15056 1496 aa32.16■■■□□ 2.74
TOP1MT-215ENST00000522043 CHMP7Q8WUX9 453 aaPredicted RBP32.12■■■□□ 2.73
TOP1MT-215ENST00000522043 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
TOP1MT-215ENST00000522043 CYB5RLQ6IPT4 315 aa32.03■■■□□ 2.72
TOP1MT-215ENST00000522043 ADAMTS12P58397 1594 aa31.97■■■□□ 2.71
TOP1MT-215ENST00000522043 GRIN2AQ12879 1464 aa31.91■■■□□ 2.7
TOP1MT-215ENST00000522043 ERICH3Q5RHP9 1530 aa31.85■■■□□ 2.69
TOP1MT-215ENST00000522043 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
TOP1MT-215ENST00000522043 FHAD1B1AJZ9 1412 aa31.82■■■□□ 2.68
TOP1MT-215ENST00000522043 NUP160Q12769 1436 aa31.81■■■□□ 2.68
TOP1MT-215ENST00000522043 ERCC6L2Q5T890 1561 aa31.73■■■□□ 2.67
TOP1MT-215ENST00000522043 SHROOM2Q13796 1616 aa31.67■■■□□ 2.66
TOP1MT-215ENST00000522043 IGF1RP08069 1367 aa31.53■■■□□ 2.64
TOP1MT-215ENST00000522043 TRHP20396 242 aaPredicted RBP31.52■■■□□ 2.64
TOP1MT-215ENST00000522043 KIF27Q86VH2 1401 aa31.51■■■□□ 2.64
TOP1MT-215ENST00000522043 RUSC2Q8N2Y8 1516 aa31.51■■■□□ 2.63
TOP1MT-215ENST00000522043 CUL7Q14999 1698 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 1775.1 ms