RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 NISCHQ9Y2I1 1504 aa20.33■□□□□ 0.85
CTNNA1-231ENST00000521941 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
CTNNA1-231ENST00000521941 ABCC9O60706 1549 aa17.8■□□□□ 0.44
CTNNA1-231ENST00000521941 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
CTNNA1-231ENST00000521941 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
CTNNA1-231ENST00000521941 NACADO15069 1562 aa17■□□□□ 0.31
CTNNA1-231ENST00000521941 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
CTNNA1-231ENST00000521941 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
CTNNA1-231ENST00000521941 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
CTNNA1-231ENST00000521941 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
CTNNA1-231ENST00000521941 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
CTNNA1-231ENST00000521941 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTNNA1-231ENST00000521941 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
CTNNA1-231ENST00000521941 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
CTNNA1-231ENST00000521941 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
CTNNA1-231ENST00000521941 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
CTNNA1-231ENST00000521941 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
CTNNA1-231ENST00000521941 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
CTNNA1-231ENST00000521941 SMARCA4P51532 1647 aa15.83■□□□□ 0.12
CTNNA1-231ENST00000521941 BAZ1AQ9NRL2 1556 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-231ENST00000521941 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
CTNNA1-231ENST00000521941 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
CTNNA1-231ENST00000521941 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
CTNNA1-231ENST00000521941 NCAPD3P42695 1498 aa15.65■□□□□ 0.1
CTNNA1-231ENST00000521941 HMGXB3Q12766 1538 aa15.63■□□□□ 0.09
CTNNA1-231ENST00000521941 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
CTNNA1-231ENST00000521941 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
CTNNA1-231ENST00000521941 WIZO95785 1651 aa15.57■□□□□ 0.08
CTNNA1-231ENST00000521941 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
CTNNA1-231ENST00000521941 NESP48681 1621 aa15.39■□□□□ 0.05
CTNNA1-231ENST00000521941 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
CTNNA1-231ENST00000521941 ERCC6Q03468 1493 aa15.34■□□□□ 0.05
CTNNA1-231ENST00000521941 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
CTNNA1-231ENST00000521941 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
CTNNA1-231ENST00000521941 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
CTNNA1-231ENST00000521941 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
CTNNA1-231ENST00000521941 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
CTNNA1-231ENST00000521941 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
CTNNA1-231ENST00000521941 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
CTNNA1-231ENST00000521941 CUX2O14529 1486 aa15.12■□□□□ 0.01
CTNNA1-231ENST00000521941 CFTRP13569 1480 aa15.12■□□□□ 0.01
CTNNA1-231ENST00000521941 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
CTNNA1-231ENST00000521941 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
CTNNA1-231ENST00000521941 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
CTNNA1-231ENST00000521941 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
CTNNA1-231ENST00000521941 WDR62O43379 1518 aa15□□□□□ -0.01
CTNNA1-231ENST00000521941 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
CTNNA1-231ENST00000521941 TOPBP1Q92547 1522 aa14.85□□□□□ -0.03
CTNNA1-231ENST00000521941 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
CTNNA1-231ENST00000521941 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
CTNNA1-231ENST00000521941 IFT140Q96RY7 1462 aa14.74□□□□□ -0.05
CTNNA1-231ENST00000521941 CUX1P39880 1505 aa14.73□□□□□ -0.05
CTNNA1-231ENST00000521941 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
CTNNA1-231ENST00000521941 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.06
CTNNA1-231ENST00000521941 FGD5Q6ZNL6 1462 aa14.7□□□□□ -0.06
CTNNA1-231ENST00000521941 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
CTNNA1-231ENST00000521941 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
CTNNA1-231ENST00000521941 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
CTNNA1-231ENST00000521941 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
CTNNA1-231ENST00000521941 SOGA1O94964 1423 aa14.64□□□□□ -0.07
CTNNA1-231ENST00000521941 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
CTNNA1-231ENST00000521941 WRNQ14191 1432 aaPredicted RBP eCLIP14.62□□□□□ -0.07
CTNNA1-231ENST00000521941 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
CTNNA1-231ENST00000521941 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■□□□ 14.5
CTNNA1-231ENST00000521941 WDR97A6NE52 1622 aa14.59□□□□□ -0.07
CTNNA1-231ENST00000521941 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
CTNNA1-231ENST00000521941 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
CTNNA1-231ENST00000521941 CHD1O14646 1710 aa14.53□□□□□ -0.08
CTNNA1-231ENST00000521941 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
CTNNA1-231ENST00000521941 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
CTNNA1-231ENST00000521941 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
CTNNA1-231ENST00000521941 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
CTNNA1-231ENST00000521941 FBLN2P98095 1184 aa14.48□□□□□ -0.09
CTNNA1-231ENST00000521941 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
CTNNA1-231ENST00000521941 GAPVD1Q14C86 1478 aa14.48□□□□□ -0.09
CTNNA1-231ENST00000521941 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
CTNNA1-231ENST00000521941 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
CTNNA1-231ENST00000521941 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
CTNNA1-231ENST00000521941 CHMP7Q8WUX9 453 aaPredicted RBP14.38□□□□□ -0.11
CTNNA1-231ENST00000521941 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
CTNNA1-231ENST00000521941 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
CTNNA1-231ENST00000521941 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
CTNNA1-231ENST00000521941 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
CTNNA1-231ENST00000521941 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
CTNNA1-231ENST00000521941 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
CTNNA1-231ENST00000521941 FHAD1B1AJZ9 1412 aa14.3□□□□□ -0.12
CTNNA1-231ENST00000521941 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
CTNNA1-231ENST00000521941 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
CTNNA1-231ENST00000521941 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
CTNNA1-231ENST00000521941 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
CTNNA1-231ENST00000521941 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
CTNNA1-231ENST00000521941 CUL7Q14999 1698 aa14.25□□□□□ -0.13
CTNNA1-231ENST00000521941 NUP160Q12769 1436 aa14.21□□□□□ -0.13
CTNNA1-231ENST00000521941 IGF1RP08069 1367 aa14.21□□□□□ -0.14
CTNNA1-231ENST00000521941 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
CTNNA1-231ENST00000521941 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
CTNNA1-231ENST00000521941 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
CTNNA1-231ENST00000521941 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
CTNNA1-231ENST00000521941 ERCC6L2Q5T890 1561 aa14.14□□□□□ -0.15
CTNNA1-231ENST00000521941 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms