RNA–Protein interactions for RNA: ENST00000521782.1

TNIP1-212, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-212ENST00000521782 NISCHQ9Y2I1 1504 aa39.1■■■■□ 3.85
TNIP1-212ENST00000521782 ABCC9O60706 1549 aa35.68■■■■□ 3.3
TNIP1-212ENST00000521782 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
TNIP1-212ENST00000521782 DNAJC5BQ9UF47 199 aa33.88■■■■□ 3.01
TNIP1-212ENST00000521782 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
TNIP1-212ENST00000521782 NACADO15069 1562 aa33.45■■■□□ 2.95
TNIP1-212ENST00000521782 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
TNIP1-212ENST00000521782 PABPN1Q86U42 306 aaKnown RBP eCLIP33.11■■■□□ 2.89
TNIP1-212ENST00000521782 DCAF8L2P0C7V8 631 aa33.03■■■□□ 2.88
TNIP1-212ENST00000521782 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.86
TNIP1-212ENST00000521782 MYO15BQ96JP2 1530 aa32.87■■■□□ 2.85
TNIP1-212ENST00000521782 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
TNIP1-212ENST00000521782 ZCCHC6Q5VYS8 1495 aaKnown RBP32.34■■■□□ 2.77
TNIP1-212ENST00000521782 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
TNIP1-212ENST00000521782 CC2D2AQ9P2K1 1620 aa32.25■■■□□ 2.75
TNIP1-212ENST00000521782 CECR2Q9BXF3 1484 aa32.18■■■□□ 2.74
TNIP1-212ENST00000521782 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
TNIP1-212ENST00000521782 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
TNIP1-212ENST00000521782 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
TNIP1-212ENST00000521782 CUX2O14529 1486 aa30.94■■■□□ 2.54
TNIP1-212ENST00000521782 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
TNIP1-212ENST00000521782 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
TNIP1-212ENST00000521782 ATAD2BQ9ULI0 1458 aa30.74■■■□□ 2.51
TNIP1-212ENST00000521782 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
TNIP1-212ENST00000521782 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
TNIP1-212ENST00000521782 SMARCA2P51531 1590 aa30.61■■■□□ 2.49
TNIP1-212ENST00000521782 NESP48681 1621 aa30.56■■■□□ 2.48
TNIP1-212ENST00000521782 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
TNIP1-212ENST00000521782 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
TNIP1-212ENST00000521782 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
TNIP1-212ENST00000521782 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
TNIP1-212ENST00000521782 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
TNIP1-212ENST00000521782 KIF21AQ7Z4S6 1674 aa30.19■■■□□ 2.42
TNIP1-212ENST00000521782 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
TNIP1-212ENST00000521782 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
TNIP1-212ENST00000521782 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
TNIP1-212ENST00000521782 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
TNIP1-212ENST00000521782 WDR62O43379 1518 aa29.84■■■□□ 2.37
TNIP1-212ENST00000521782 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
TNIP1-212ENST00000521782 WIZO95785 1651 aa29.76■■■□□ 2.36
TNIP1-212ENST00000521782 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
TNIP1-212ENST00000521782 FANCD2Q9BXW9 1451 aa29.57■■■□□ 2.32
TNIP1-212ENST00000521782 CFTRP13569 1480 aa29.49■■■□□ 2.31
TNIP1-212ENST00000521782 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.31
TNIP1-212ENST00000521782 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
TNIP1-212ENST00000521782 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
TNIP1-212ENST00000521782 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
TNIP1-212ENST00000521782 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
TNIP1-212ENST00000521782 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
TNIP1-212ENST00000521782 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
TNIP1-212ENST00000521782 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
TNIP1-212ENST00000521782 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
TNIP1-212ENST00000521782 ZNF608Q9ULD9 1512 aaPredicted RBP29.1■■■□□ 2.25
TNIP1-212ENST00000521782 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
TNIP1-212ENST00000521782 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
TNIP1-212ENST00000521782 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
TNIP1-212ENST00000521782 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
TNIP1-212ENST00000521782 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
TNIP1-212ENST00000521782 ABCC8Q09428 1581 aa28.84■■■□□ 2.21
TNIP1-212ENST00000521782 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
TNIP1-212ENST00000521782 CHD1O14646 1710 aa28.81■■■□□ 2.2
TNIP1-212ENST00000521782 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
TNIP1-212ENST00000521782 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.191e-7■■■■■ 39.4
TNIP1-212ENST00000521782 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
TNIP1-212ENST00000521782 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
TNIP1-212ENST00000521782 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
TNIP1-212ENST00000521782 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
TNIP1-212ENST00000521782 FBLN2P98095 1184 aa28.54■■■□□ 2.16
TNIP1-212ENST00000521782 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
TNIP1-212ENST00000521782 TDRD9Q8NDG6 1382 aaKnown RBP28.48■■■□□ 2.15
TNIP1-212ENST00000521782 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
TNIP1-212ENST00000521782 SOGA1O94964 1423 aa28.46■■■□□ 2.15
TNIP1-212ENST00000521782 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
TNIP1-212ENST00000521782 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
TNIP1-212ENST00000521782 FGD5Q6ZNL6 1462 aa28.41■■■□□ 2.14
TNIP1-212ENST00000521782 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
TNIP1-212ENST00000521782 CUX1P39880 1505 aa28.35■■■□□ 2.13
TNIP1-212ENST00000521782 SYNJ1O43426 1573 aa28.35■■■□□ 2.13
TNIP1-212ENST00000521782 GRIN2BQ13224 1484 aa28.29■■■□□ 2.12
TNIP1-212ENST00000521782 CHMP7Q8WUX9 453 aaPredicted RBP28.28■■■□□ 2.12
TNIP1-212ENST00000521782 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
TNIP1-212ENST00000521782 PBRM1Q86U86 1689 aa28.23■■■□□ 2.11
TNIP1-212ENST00000521782 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
TNIP1-212ENST00000521782 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
TNIP1-212ENST00000521782 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
TNIP1-212ENST00000521782 ERCC6L2Q5T890 1561 aa28■■■□□ 2.07
TNIP1-212ENST00000521782 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
TNIP1-212ENST00000521782 GRIN2AQ12879 1464 aa27.95■■■□□ 2.07
TNIP1-212ENST00000521782 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
TNIP1-212ENST00000521782 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
TNIP1-212ENST00000521782 NUP160Q12769 1436 aa27.9■■■□□ 2.06
TNIP1-212ENST00000521782 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
TNIP1-212ENST00000521782 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
TNIP1-212ENST00000521782 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
TNIP1-212ENST00000521782 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
TNIP1-212ENST00000521782 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
TNIP1-212ENST00000521782 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
TNIP1-212ENST00000521782 ERICH3Q5RHP9 1530 aa27.71■■■□□ 2.03
TNIP1-212ENST00000521782 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
TNIP1-212ENST00000521782 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms